Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.77□□□□□ -0.05
ABCA1O95477 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
ABCA1O95477 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ABCA1O95477 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ABCA1O95477 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
ABCA1O95477 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
ABCA1O95477 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
ABCA1O95477 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC14.77□□□□□ -0.05
ABCA1O95477 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
ABCA1O95477 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ABCA1O95477 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ABCA1O95477 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ABCA1O95477 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.76□□□□□ -0.05
ABCA1O95477 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
ABCA1O95477 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ABCA1O95477 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC14.76□□□□□ -0.05
ABCA1O95477 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
ABCA1O95477 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
ABCA1O95477 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ABCA1O95477 KRT18P27-201ENST00000427733 1299 ntBASIC14.76□□□□□ -0.05
ABCA1O95477 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC14.76□□□□□ -0.05
ABCA1O95477 CYMP-203ENST00000474680 1263 ntBASIC14.76□□□□□ -0.05
ABCA1O95477 TCAP-202ENST00000578283 583 ntTSL 5 BASIC14.76□□□□□ -0.05
ABCA1O95477 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ABCA1O95477 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
ABCA1O95477 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC14.76□□□□□ -0.05
ABCA1O95477 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ABCA1O95477 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
ABCA1O95477 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ABCA1O95477 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC14.76□□□□□ -0.05
ABCA1O95477 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ABCA1O95477 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ABCA1O95477 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
ABCA1O95477 CACNA1G-202ENST00000354983 8138 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
ABCA1O95477 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
ABCA1O95477 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
ABCA1O95477 AC026471.1-201ENST00000564629 3026 ntBASIC14.76□□□□□ -0.05
ABCA1O95477 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ABCA1O95477 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC14.76□□□□□ -0.05
ABCA1O95477 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC14.76□□□□□ -0.05
ABCA1O95477 AC108751.1-201ENST00000490852 363 ntBASIC14.76□□□□□ -0.05
ABCA1O95477 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC14.76□□□□□ -0.05
ABCA1O95477 RNF151-202ENST00000569210 853 ntTSL 2 BASIC14.76□□□□□ -0.05
ABCA1O95477 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC14.76□□□□□ -0.05
ABCA1O95477 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
ABCA1O95477 AC126763.1-201ENST00000552015 2118 ntBASIC14.76□□□□□ -0.05
ABCA1O95477 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC14.76□□□□□ -0.05
ABCA1O95477 AC097374.2-201ENST00000618617 1306 ntBASIC14.76□□□□□ -0.05
ABCA1O95477 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
ABCA1O95477 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC14.75□□□□□ -0.05
ABCA1O95477 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC14.75□□□□□ -0.05
ABCA1O95477 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
ABCA1O95477 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ABCA1O95477 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC14.75□□□□□ -0.05
ABCA1O95477 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC14.75□□□□□ -0.05
ABCA1O95477 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ABCA1O95477 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ABCA1O95477 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ABCA1O95477 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ABCA1O95477 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ABCA1O95477 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ABCA1O95477 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC14.75□□□□□ -0.05
ABCA1O95477 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC14.75□□□□□ -0.05
ABCA1O95477 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
ABCA1O95477 ETFA-208ENST00000559602 792 ntTSL 3 BASIC14.75□□□□□ -0.05
ABCA1O95477 AC018845.2-201ENST00000568326 409 ntBASIC14.75□□□□□ -0.05
ABCA1O95477 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC14.75□□□□□ -0.05
ABCA1O95477 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ABCA1O95477 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
ABCA1O95477 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ABCA1O95477 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ABCA1O95477 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
ABCA1O95477 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
ABCA1O95477 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
ABCA1O95477 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC14.75□□□□□ -0.05
ABCA1O95477 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ABCA1O95477 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC14.75□□□□□ -0.05
ABCA1O95477 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
ABCA1O95477 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
ABCA1O95477 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC14.75□□□□□ -0.05
ABCA1O95477 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
ABCA1O95477 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
ABCA1O95477 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
ABCA1O95477 AL035633.1-201ENST00000406139 838 ntBASIC14.75□□□□□ -0.05
ABCA1O95477 PON3-203ENST00000427422 894 ntTSL 3 BASIC14.75□□□□□ -0.05
ABCA1O95477 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.75□□□□□ -0.05
ABCA1O95477 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC14.75□□□□□ -0.05
ABCA1O95477 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.75□□□□□ -0.05
ABCA1O95477 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.75□□□□□ -0.05
ABCA1O95477 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC14.75□□□□□ -0.05
ABCA1O95477 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.75□□□□□ -0.05
ABCA1O95477 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC14.75□□□□□ -0.05
ABCA1O95477 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
ABCA1O95477 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC14.74□□□□□ -0.05
ABCA1O95477 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ABCA1O95477 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ABCA1O95477 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
ABCA1O95477 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
ABCA1O95477 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
ABCA1O95477 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC14.74□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms