Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
RAPGEF3O95398 AC126763.1-201ENST00000552015 2118 ntBASIC26.14■■□□□ 1.77
RAPGEF3O95398 AC009949.1-201ENST00000623048 1830 ntBASIC26.14■■□□□ 1.77
RAPGEF3O95398 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.77
RAPGEF3O95398 AC129492.6-201ENST00000611383 1305 ntBASIC26.14■■□□□ 1.77
RAPGEF3O95398 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC26.13■■□□□ 1.77
RAPGEF3O95398 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
RAPGEF3O95398 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
RAPGEF3O95398 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
RAPGEF3O95398 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC26.13■■□□□ 1.77
RAPGEF3O95398 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
RAPGEF3O95398 AC245100.3-201ENST00000441281 285 ntBASIC26.13■■□□□ 1.77
RAPGEF3O95398 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC26.13■■□□□ 1.77
RAPGEF3O95398 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC26.13■■□□□ 1.77
RAPGEF3O95398 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC26.13■■□□□ 1.77
RAPGEF3O95398 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC26.13■■□□□ 1.77
RAPGEF3O95398 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC26.13■■□□□ 1.77
RAPGEF3O95398 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
RAPGEF3O95398 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC26.13■■□□□ 1.77
RAPGEF3O95398 FLYWCH1P1-201ENST00000460917 1874 ntBASIC26.13■■□□□ 1.77
RAPGEF3O95398 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
RAPGEF3O95398 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RAPGEF3O95398 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RAPGEF3O95398 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
RAPGEF3O95398 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC26.12■■□□□ 1.77
RAPGEF3O95398 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC26.12■■□□□ 1.77
RAPGEF3O95398 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
RAPGEF3O95398 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC26.12■■□□□ 1.77
RAPGEF3O95398 MIR6080-201ENST00000617359 66 ntBASIC26.12■■□□□ 1.77
RAPGEF3O95398 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC26.12■■□□□ 1.77
RAPGEF3O95398 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
RAPGEF3O95398 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
RAPGEF3O95398 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC26.12■■□□□ 1.77
RAPGEF3O95398 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
RAPGEF3O95398 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
RAPGEF3O95398 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC26.11■■□□□ 1.77
RAPGEF3O95398 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC26.11■■□□□ 1.77
RAPGEF3O95398 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC26.11■■□□□ 1.77
RAPGEF3O95398 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
RAPGEF3O95398 BX276092.7-203ENST00000637198 1536 ntBASIC26.11■■□□□ 1.77
RAPGEF3O95398 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC26.11■■□□□ 1.77
RAPGEF3O95398 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
RAPGEF3O95398 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC26.11■■□□□ 1.77
RAPGEF3O95398 IGHV3-62-201ENST00000520057 340 ntBASIC26.11■■□□□ 1.77
RAPGEF3O95398 AC107918.2-201ENST00000530817 355 ntBASIC26.11■■□□□ 1.77
RAPGEF3O95398 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
RAPGEF3O95398 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
RAPGEF3O95398 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC26.11■■□□□ 1.77
RAPGEF3O95398 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC26.11■■□□□ 1.77
RAPGEF3O95398 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
RAPGEF3O95398 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC26.11■■□□□ 1.77
RAPGEF3O95398 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
RAPGEF3O95398 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
RAPGEF3O95398 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
RAPGEF3O95398 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC26.1■■□□□ 1.77
RAPGEF3O95398 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
RAPGEF3O95398 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RAPGEF3O95398 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
RAPGEF3O95398 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC26.1■■□□□ 1.77
RAPGEF3O95398 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC26.1■■□□□ 1.77
RAPGEF3O95398 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RAPGEF3O95398 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
RAPGEF3O95398 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RAPGEF3O95398 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RAPGEF3O95398 PGF-202ENST00000405431 666 ntTSL 5 BASIC26.1■■□□□ 1.77
RAPGEF3O95398 AC241585.1-201ENST00000433527 519 ntBASIC26.1■■□□□ 1.77
RAPGEF3O95398 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC26.1■■□□□ 1.77
RAPGEF3O95398 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC26.1■■□□□ 1.77
RAPGEF3O95398 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC26.1■■□□□ 1.77
RAPGEF3O95398 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC26.1■■□□□ 1.77
RAPGEF3O95398 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
RAPGEF3O95398 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC26.1■■□□□ 1.77
RAPGEF3O95398 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC26.1■■□□□ 1.77
RAPGEF3O95398 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RAPGEF3O95398 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC26.1■■□□□ 1.77
RAPGEF3O95398 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC26.1■■□□□ 1.77
RAPGEF3O95398 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC26.1■■□□□ 1.77
RAPGEF3O95398 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC26.1■■□□□ 1.77
RAPGEF3O95398 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
RAPGEF3O95398 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC26.09■■□□□ 1.77
RAPGEF3O95398 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
RAPGEF3O95398 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
RAPGEF3O95398 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
RAPGEF3O95398 TSSK5P-201ENST00000423978 907 ntBASIC26.09■■□□□ 1.77
RAPGEF3O95398 IGHV3-71-201ENST00000523324 359 ntBASIC26.09■■□□□ 1.77
RAPGEF3O95398 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
RAPGEF3O95398 AC009118.2-201ENST00000613275 655 ntBASIC26.09■■□□□ 1.77
RAPGEF3O95398 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
RAPGEF3O95398 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
RAPGEF3O95398 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
RAPGEF3O95398 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC26.08■■□□□ 1.77
RAPGEF3O95398 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
RAPGEF3O95398 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC26.08■■□□□ 1.77
RAPGEF3O95398 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC26.08■■□□□ 1.77
RAPGEF3O95398 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC26.08■■□□□ 1.77
RAPGEF3O95398 CU639417.3-201ENST00000624240 1404 ntBASIC26.08■■□□□ 1.77
RAPGEF3O95398 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
RAPGEF3O95398 CALY-202ENST00000368555 783 ntTSL 2 BASIC26.08■■□□□ 1.77
RAPGEF3O95398 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC26.08■■□□□ 1.77
RAPGEF3O95398 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC26.08■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms