Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VAPBO95292 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC17.72■□□□□ 0.43
VAPBO95292 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.72■□□□□ 0.43
VAPBO95292 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.72■□□□□ 0.43
VAPBO95292 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.72■□□□□ 0.43
VAPBO95292 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VAPBO95292 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.72■□□□□ 0.43
VAPBO95292 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VAPBO95292 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
VAPBO95292 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VAPBO95292 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VAPBO95292 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
VAPBO95292 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
VAPBO95292 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC17.71■□□□□ 0.43
VAPBO95292 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
VAPBO95292 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VAPBO95292 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
VAPBO95292 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VAPBO95292 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VAPBO95292 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
VAPBO95292 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC17.71■□□□□ 0.43
VAPBO95292 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VAPBO95292 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
VAPBO95292 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.71■□□□□ 0.43
VAPBO95292 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.71■□□□□ 0.43
VAPBO95292 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VAPBO95292 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
VAPBO95292 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
VAPBO95292 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VAPBO95292 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VAPBO95292 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VAPBO95292 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC17.71■□□□□ 0.43
VAPBO95292 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
VAPBO95292 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC17.71■□□□□ 0.43
VAPBO95292 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VAPBO95292 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VAPBO95292 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.71■□□□□ 0.43
VAPBO95292 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VAPBO95292 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VAPBO95292 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.71■□□□□ 0.43
VAPBO95292 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VAPBO95292 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
VAPBO95292 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
VAPBO95292 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VAPBO95292 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
VAPBO95292 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VAPBO95292 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
VAPBO95292 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
VAPBO95292 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
VAPBO95292 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
VAPBO95292 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.71■□□□□ 0.42
VAPBO95292 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.71■□□□□ 0.42
VAPBO95292 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.71■□□□□ 0.42
VAPBO95292 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VAPBO95292 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VAPBO95292 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
VAPBO95292 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.7■□□□□ 0.42
VAPBO95292 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
VAPBO95292 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VAPBO95292 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC17.7■□□□□ 0.42
VAPBO95292 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VAPBO95292 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.7■□□□□ 0.42
VAPBO95292 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VAPBO95292 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VAPBO95292 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VAPBO95292 AL031133.1-201ENST00000406807 723 ntBASIC17.7■□□□□ 0.42
VAPBO95292 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC17.7■□□□□ 0.42
VAPBO95292 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.7■□□□□ 0.42
VAPBO95292 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VAPBO95292 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.7■□□□□ 0.42
VAPBO95292 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC17.7■□□□□ 0.42
VAPBO95292 AL049597.2-201ENST00000565575 961 ntBASIC17.7■□□□□ 0.42
VAPBO95292 AC124864.1-201ENST00000623408 392 ntBASIC17.7■□□□□ 0.42
VAPBO95292 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VAPBO95292 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
VAPBO95292 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
VAPBO95292 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
VAPBO95292 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
VAPBO95292 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
VAPBO95292 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC17.7■□□□□ 0.42
VAPBO95292 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
VAPBO95292 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VAPBO95292 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
VAPBO95292 AC010460.3-201ENST00000511359 1579 ntBASIC17.7■□□□□ 0.42
VAPBO95292 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
VAPBO95292 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
VAPBO95292 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
VAPBO95292 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC17.69■□□□□ 0.42
VAPBO95292 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC17.69■□□□□ 0.42
VAPBO95292 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
VAPBO95292 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VAPBO95292 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
VAPBO95292 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.69■□□□□ 0.42
VAPBO95292 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VAPBO95292 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
VAPBO95292 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
VAPBO95292 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC17.69■□□□□ 0.42
VAPBO95292 AC005104.2-201ENST00000427818 678 ntBASIC17.69■□□□□ 0.42
VAPBO95292 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
VAPBO95292 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 91.9 ms