Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC18.46■□□□□ 0.55
BEST1O76090 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BEST1O76090 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BEST1O76090 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
BEST1O76090 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
BEST1O76090 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.46■□□□□ 0.55
BEST1O76090 PNMT-203ENST00000581428 677 ntTSL 2 BASIC18.46■□□□□ 0.55
BEST1O76090 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC18.46■□□□□ 0.55
BEST1O76090 AL773604.1-201ENST00000617417 272 ntBASIC18.46■□□□□ 0.55
BEST1O76090 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BEST1O76090 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
BEST1O76090 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
BEST1O76090 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BEST1O76090 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
BEST1O76090 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
BEST1O76090 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC18.46■□□□□ 0.55
BEST1O76090 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.46■□□□□ 0.55
BEST1O76090 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.46■□□□□ 0.55
BEST1O76090 AC009336.1-201ENST00000608941 1553 ntBASIC18.46■□□□□ 0.55
BEST1O76090 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BEST1O76090 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
BEST1O76090 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
BEST1O76090 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC18.46■□□□□ 0.55
BEST1O76090 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.46■□□□□ 0.55
BEST1O76090 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
BEST1O76090 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
BEST1O76090 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
BEST1O76090 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BEST1O76090 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BEST1O76090 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.45■□□□□ 0.54
BEST1O76090 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BEST1O76090 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BEST1O76090 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.45■□□□□ 0.54
BEST1O76090 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
BEST1O76090 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.45■□□□□ 0.54
BEST1O76090 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.45■□□□□ 0.54
BEST1O76090 AC133963.1-201ENST00000504166 1679 ntBASIC18.45■□□□□ 0.54
BEST1O76090 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
BEST1O76090 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BEST1O76090 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC18.45■□□□□ 0.54
BEST1O76090 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BEST1O76090 AC003669.1-201ENST00000334569 611 ntBASIC18.45■□□□□ 0.54
BEST1O76090 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BEST1O76090 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
BEST1O76090 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.45■□□□□ 0.54
BEST1O76090 AL031284.1-201ENST00000419297 478 ntBASIC18.45■□□□□ 0.54
BEST1O76090 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
BEST1O76090 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
BEST1O76090 AL662844.1-201ENST00000546340 181 ntBASIC18.45■□□□□ 0.54
BEST1O76090 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.45■□□□□ 0.54
BEST1O76090 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.45■□□□□ 0.54
BEST1O76090 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.45■□□□□ 0.54
BEST1O76090 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.45■□□□□ 0.54
BEST1O76090 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.45■□□□□ 0.54
BEST1O76090 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
BEST1O76090 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.45■□□□□ 0.54
BEST1O76090 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
BEST1O76090 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
BEST1O76090 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
BEST1O76090 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
BEST1O76090 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
BEST1O76090 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BEST1O76090 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.44■□□□□ 0.54
BEST1O76090 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.44■□□□□ 0.54
BEST1O76090 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BEST1O76090 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BEST1O76090 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
BEST1O76090 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
BEST1O76090 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
BEST1O76090 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
BEST1O76090 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.44■□□□□ 0.54
BEST1O76090 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.44■□□□□ 0.54
BEST1O76090 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
BEST1O76090 PRYP5-201ENST00000451909 266 ntBASIC18.44■□□□□ 0.54
BEST1O76090 AC079776.4-201ENST00000511039 504 ntBASIC18.44■□□□□ 0.54
BEST1O76090 AC012640.2-201ENST00000561606 901 ntBASIC18.44■□□□□ 0.54
BEST1O76090 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.44■□□□□ 0.54
BEST1O76090 RNF151-202ENST00000569210 853 ntTSL 2 BASIC18.44■□□□□ 0.54
BEST1O76090 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.44■□□□□ 0.54
BEST1O76090 MIR7706-201ENST00000613747 67 ntBASIC18.44■□□□□ 0.54
BEST1O76090 FAM215A-202ENST00000632077 792 ntBASIC18.44■□□□□ 0.54
BEST1O76090 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
BEST1O76090 AL022326.1-202ENST00000641533 845 ntBASIC18.44■□□□□ 0.54
BEST1O76090 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC18.44■□□□□ 0.54
BEST1O76090 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.44■□□□□ 0.54
BEST1O76090 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
BEST1O76090 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
BEST1O76090 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
BEST1O76090 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
BEST1O76090 LYSMD4-203ENST00000378904 2122 ntBASIC18.44■□□□□ 0.54
BEST1O76090 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
BEST1O76090 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
BEST1O76090 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
BEST1O76090 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
BEST1O76090 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.44■□□□□ 0.54
BEST1O76090 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
BEST1O76090 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
BEST1O76090 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
BEST1O76090 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
BEST1O76090 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms