Protein–RNA interactions for Protein: O75427

LRCH4, Leucine-rich repeat and calponin homology domain-containing protein 4, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4O75427 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRCH4O75427 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.32■□□□□ 0.52
LRCH4O75427 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
LRCH4O75427 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.32■□□□□ 0.52
LRCH4O75427 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRCH4O75427 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC18.32■□□□□ 0.52
LRCH4O75427 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRCH4O75427 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRCH4O75427 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRCH4O75427 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRCH4O75427 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.32■□□□□ 0.52
LRCH4O75427 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC18.32■□□□□ 0.52
LRCH4O75427 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRCH4O75427 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRCH4O75427 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
LRCH4O75427 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.32■□□□□ 0.52
LRCH4O75427 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRCH4O75427 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.32■□□□□ 0.52
LRCH4O75427 AC009533.2-201ENST00000543664 586 ntBASIC18.32■□□□□ 0.52
LRCH4O75427 TK1-204ENST00000590430 683 ntTSL 3 BASIC18.32■□□□□ 0.52
LRCH4O75427 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRCH4O75427 AC011467.2-201ENST00000598425 242 ntBASIC18.32■□□□□ 0.52
LRCH4O75427 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
LRCH4O75427 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.32■□□□□ 0.52
LRCH4O75427 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC18.32■□□□□ 0.52
LRCH4O75427 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRCH4O75427 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC18.32■□□□□ 0.52
LRCH4O75427 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.32■□□□□ 0.52
LRCH4O75427 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
LRCH4O75427 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRCH4O75427 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC18.32■□□□□ 0.52
LRCH4O75427 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
LRCH4O75427 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.32■□□□□ 0.52
LRCH4O75427 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
LRCH4O75427 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC18.32■□□□□ 0.52
LRCH4O75427 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
LRCH4O75427 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC18.32■□□□□ 0.52
LRCH4O75427 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.32■□□□□ 0.52
LRCH4O75427 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.31■□□□□ 0.52
LRCH4O75427 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRCH4O75427 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LRCH4O75427 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRCH4O75427 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRCH4O75427 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRCH4O75427 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRCH4O75427 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC18.31■□□□□ 0.52
LRCH4O75427 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRCH4O75427 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LRCH4O75427 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LRCH4O75427 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
LRCH4O75427 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRCH4O75427 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LRCH4O75427 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRCH4O75427 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
LRCH4O75427 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC18.31■□□□□ 0.52
LRCH4O75427 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.31■□□□□ 0.52
LRCH4O75427 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.31■□□□□ 0.52
LRCH4O75427 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.31■□□□□ 0.52
LRCH4O75427 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.31■□□□□ 0.52
LRCH4O75427 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
LRCH4O75427 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.31■□□□□ 0.52
LRCH4O75427 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.31■□□□□ 0.52
LRCH4O75427 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.31■□□□□ 0.52
LRCH4O75427 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
LRCH4O75427 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRCH4O75427 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.31■□□□□ 0.52
LRCH4O75427 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.31■□□□□ 0.52
LRCH4O75427 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
LRCH4O75427 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRCH4O75427 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRCH4O75427 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC18.31■□□□□ 0.52
LRCH4O75427 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRCH4O75427 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LRCH4O75427 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRCH4O75427 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRCH4O75427 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC18.31■□□□□ 0.52
LRCH4O75427 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRCH4O75427 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRCH4O75427 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRCH4O75427 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LRCH4O75427 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.3■□□□□ 0.52
LRCH4O75427 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC18.3■□□□□ 0.52
LRCH4O75427 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRCH4O75427 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LRCH4O75427 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LRCH4O75427 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRCH4O75427 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LRCH4O75427 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.3■□□□□ 0.52
LRCH4O75427 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRCH4O75427 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRCH4O75427 LINC00265-3P-201ENST00000447588 903 ntBASIC18.3■□□□□ 0.52
LRCH4O75427 KRT17P6-201ENST00000453795 1220 ntBASIC18.3■□□□□ 0.52
LRCH4O75427 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18.3■□□□□ 0.52
LRCH4O75427 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRCH4O75427 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LRCH4O75427 Z69720.1-201ENST00000601483 472 ntBASIC18.3■□□□□ 0.52
LRCH4O75427 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC18.3■□□□□ 0.52
LRCH4O75427 AC069148.1-201ENST00000608741 768 ntBASIC18.3■□□□□ 0.52
LRCH4O75427 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.3■□□□□ 0.52
LRCH4O75427 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms