Protein–RNA interactions for Protein: O75400

PRPF40A, Pre-mRNA-processing factor 40 homolog A, humanhuman

Known RBP Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40AO75400 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
PRPF40AO75400 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC20.52■□□□□ 0.88
PRPF40AO75400 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC20.52■□□□□ 0.88
PRPF40AO75400 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC20.52■□□□□ 0.87
PRPF40AO75400 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC20.52■□□□□ 0.87
PRPF40AO75400 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
PRPF40AO75400 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
PRPF40AO75400 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
PRPF40AO75400 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC20.51■□□□□ 0.87
PRPF40AO75400 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PRPF40AO75400 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PRPF40AO75400 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PRPF40AO75400 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PRPF40AO75400 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PRPF40AO75400 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
PRPF40AO75400 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.51■□□□□ 0.87
PRPF40AO75400 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRPF40AO75400 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
PRPF40AO75400 CCR12P-201ENST00000446203 998 ntBASIC20.51■□□□□ 0.87
PRPF40AO75400 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.51■□□□□ 0.87
PRPF40AO75400 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.51■□□□□ 0.87
PRPF40AO75400 NAPSB-206ENST00000562112 1266 ntBASIC20.51■□□□□ 0.87
PRPF40AO75400 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PRPF40AO75400 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRPF40AO75400 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC20.51■□□□□ 0.87
PRPF40AO75400 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
PRPF40AO75400 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRPF40AO75400 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRPF40AO75400 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
PRPF40AO75400 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRPF40AO75400 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRPF40AO75400 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRPF40AO75400 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRPF40AO75400 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
PRPF40AO75400 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
PRPF40AO75400 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
PRPF40AO75400 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRPF40AO75400 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
PRPF40AO75400 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
PRPF40AO75400 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRPF40AO75400 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
PRPF40AO75400 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRPF40AO75400 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PRPF40AO75400 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
PRPF40AO75400 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PRPF40AO75400 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC20.5■□□□□ 0.87
PRPF40AO75400 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
PRPF40AO75400 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC20.5■□□□□ 0.87
PRPF40AO75400 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
PRPF40AO75400 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
PRPF40AO75400 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRPF40AO75400 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.5■□□□□ 0.87
PRPF40AO75400 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.5■□□□□ 0.87
PRPF40AO75400 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PRPF40AO75400 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC20.5■□□□□ 0.87
PRPF40AO75400 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.5■□□□□ 0.87
PRPF40AO75400 TSPY17P-201ENST00000450329 467 ntBASIC20.5■□□□□ 0.87
PRPF40AO75400 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRPF40AO75400 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
PRPF40AO75400 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.5■□□□□ 0.87
PRPF40AO75400 AC116407.2-201ENST00000613639 860 ntBASIC20.5■□□□□ 0.87
PRPF40AO75400 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
PRPF40AO75400 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PRPF40AO75400 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
PRPF40AO75400 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC20.5■□□□□ 0.87
PRPF40AO75400 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
PRPF40AO75400 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRPF40AO75400 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.5■□□□□ 0.87
PRPF40AO75400 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRPF40AO75400 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRPF40AO75400 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
PRPF40AO75400 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRPF40AO75400 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRPF40AO75400 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
PRPF40AO75400 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
PRPF40AO75400 CYP2D8P-201ENST00000433633 1490 ntBASIC20.5■□□□□ 0.87
PRPF40AO75400 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PRPF40AO75400 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
PRPF40AO75400 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRPF40AO75400 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PRPF40AO75400 AC008741.2-201ENST00000612792 3115 ntBASIC20.49■□□□□ 0.87
PRPF40AO75400 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRPF40AO75400 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC20.49■□□□□ 0.87
PRPF40AO75400 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
PRPF40AO75400 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRPF40AO75400 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRPF40AO75400 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
PRPF40AO75400 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
PRPF40AO75400 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
PRPF40AO75400 OS9-205ENST00000413095 1660 ntTSL 2 BASIC20.49■□□□□ 0.87
PRPF40AO75400 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRPF40AO75400 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRPF40AO75400 TSPY14P-201ENST00000303979 915 ntBASIC20.49■□□□□ 0.87
PRPF40AO75400 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
PRPF40AO75400 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.49■□□□□ 0.87
PRPF40AO75400 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.49■□□□□ 0.87
PRPF40AO75400 KRT18P21-201ENST00000515767 1272 ntBASIC20.49■□□□□ 0.87
PRPF40AO75400 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.49■□□□□ 0.87
PRPF40AO75400 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC20.49■□□□□ 0.87
PRPF40AO75400 EGLN1P1-201ENST00000531623 762 ntBASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms