Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 AC005332.8-201ENST00000622750 2735 ntBASIC24.29■■□□□ 1.48
BRD4O60885 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
BRD4O60885 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
BRD4O60885 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
BRD4O60885 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
BRD4O60885 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC24.29■■□□□ 1.48
BRD4O60885 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC24.29■■□□□ 1.48
BRD4O60885 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
BRD4O60885 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
BRD4O60885 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC24.29■■□□□ 1.48
BRD4O60885 FIS1-203ENST00000442303 631 ntTSL 3 BASIC24.29■■□□□ 1.48
BRD4O60885 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
BRD4O60885 BX005266.1-201ENST00000473402 457 ntBASIC24.29■■□□□ 1.48
BRD4O60885 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC24.29■■□□□ 1.48
BRD4O60885 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
BRD4O60885 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC24.29■■□□□ 1.48
BRD4O60885 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC24.29■■□□□ 1.48
BRD4O60885 AC136632.2-201ENST00000512891 861 ntBASIC24.29■■□□□ 1.48
BRD4O60885 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC24.29■■□□□ 1.48
BRD4O60885 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC24.29■■□□□ 1.48
BRD4O60885 AC010327.4-202ENST00000591484 748 ntBASIC24.29■■□□□ 1.48
BRD4O60885 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
BRD4O60885 AL589182.2-201ENST00000619332 1049 ntBASIC24.29■■□□□ 1.48
BRD4O60885 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC24.28■■□□□ 1.48
BRD4O60885 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
BRD4O60885 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC24.28■■□□□ 1.48
BRD4O60885 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
BRD4O60885 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
BRD4O60885 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
BRD4O60885 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC24.28■■□□□ 1.48
BRD4O60885 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC24.28■■□□□ 1.48
BRD4O60885 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
BRD4O60885 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
BRD4O60885 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
BRD4O60885 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
BRD4O60885 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC24.28■■□□□ 1.48
BRD4O60885 AC012317.2-201ENST00000623305 2251 ntBASIC24.28■■□□□ 1.48
BRD4O60885 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC24.28■■□□□ 1.48
BRD4O60885 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC24.28■■□□□ 1.48
BRD4O60885 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
BRD4O60885 BEX3-201ENST00000361298 921 ntTSL 2 BASIC24.28■■□□□ 1.48
BRD4O60885 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC24.28■■□□□ 1.48
BRD4O60885 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC24.28■■□□□ 1.48
BRD4O60885 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC24.28■■□□□ 1.48
BRD4O60885 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC24.28■■□□□ 1.48
BRD4O60885 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC24.28■■□□□ 1.48
BRD4O60885 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC24.28■■□□□ 1.48
BRD4O60885 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC24.28■■□□□ 1.48
BRD4O60885 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC24.28■■□□□ 1.48
BRD4O60885 AP001160.2-201ENST00000596071 487 ntBASIC24.28■■□□□ 1.48
BRD4O60885 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC24.28■■□□□ 1.48
BRD4O60885 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
BRD4O60885 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
BRD4O60885 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
BRD4O60885 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC24.27■■□□□ 1.48
BRD4O60885 AL353593.2-201ENST00000602529 1483 ntBASIC24.27■■□□□ 1.48
BRD4O60885 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
BRD4O60885 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
BRD4O60885 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
BRD4O60885 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC24.27■■□□□ 1.48
BRD4O60885 NME9-203ENST00000383180 2133 ntTSL 2 BASIC24.27■■□□□ 1.48
BRD4O60885 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC24.27■■□□□ 1.48
BRD4O60885 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
BRD4O60885 COX5BP2-201ENST00000392354 334 ntBASIC24.27■■□□□ 1.48
BRD4O60885 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC24.27■■□□□ 1.48
BRD4O60885 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC24.27■■□□□ 1.48
BRD4O60885 SDCCAG3P1-201ENST00000589292 1150 ntBASIC24.27■■□□□ 1.48
BRD4O60885 AL139424.1-201ENST00000607572 797 ntBASIC24.27■■□□□ 1.48
BRD4O60885 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
BRD4O60885 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC24.26■■□□□ 1.47
BRD4O60885 LINC00896-202ENST00000609602 2128 ntBASIC24.26■■□□□ 1.47
BRD4O60885 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC24.26■■□□□ 1.47
BRD4O60885 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC24.26■■□□□ 1.47
BRD4O60885 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
BRD4O60885 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
BRD4O60885 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC24.26■■□□□ 1.47
BRD4O60885 AC022898.2-201ENST00000616822 1312 ntBASIC24.26■■□□□ 1.47
BRD4O60885 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
BRD4O60885 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC24.26■■□□□ 1.47
BRD4O60885 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
BRD4O60885 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC24.26■■□□□ 1.47
BRD4O60885 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
BRD4O60885 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
BRD4O60885 URGCP-206ENST00000446958 365 ntTSL 2 BASIC24.26■■□□□ 1.47
BRD4O60885 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC24.26■■□□□ 1.47
BRD4O60885 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
BRD4O60885 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC24.26■■□□□ 1.47
BRD4O60885 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC24.26■■□□□ 1.47
BRD4O60885 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC24.26■■□□□ 1.47
BRD4O60885 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC24.25■■□□□ 1.47
BRD4O60885 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
BRD4O60885 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
BRD4O60885 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC24.25■■□□□ 1.47
BRD4O60885 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
BRD4O60885 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC24.25■■□□□ 1.47
BRD4O60885 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC24.25■■□□□ 1.47
BRD4O60885 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
BRD4O60885 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
BRD4O60885 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC24.25■■□□□ 1.47
BRD4O60885 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms