Protein–RNA interactions for Protein: O60880

SH2D1A, SH2 domain-containing protein 1A, humanhuman

Predictions only

Length 128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D1AO60880 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SH2D1AO60880 PHB2-202ENST00000440277 996 ntTSL 5 BASIC13.2□□□□□ -0.3
SH2D1AO60880 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC13.2□□□□□ -0.3
SH2D1AO60880 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC13.2□□□□□ -0.3
SH2D1AO60880 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC13.2□□□□□ -0.3
SH2D1AO60880 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC13.2□□□□□ -0.3
SH2D1AO60880 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC13.2□□□□□ -0.3
SH2D1AO60880 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC13.2□□□□□ -0.3
SH2D1AO60880 AL359736.2-201ENST00000621992 437 ntBASIC13.2□□□□□ -0.3
SH2D1AO60880 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SH2D1AO60880 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SH2D1AO60880 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SH2D1AO60880 OS9-205ENST00000413095 1660 ntTSL 2 BASIC13.2□□□□□ -0.3
SH2D1AO60880 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
SH2D1AO60880 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SH2D1AO60880 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SH2D1AO60880 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SH2D1AO60880 AC016396.2-201ENST00000562575 1417 ntBASIC13.2□□□□□ -0.3
SH2D1AO60880 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SH2D1AO60880 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SH2D1AO60880 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SH2D1AO60880 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC13.2□□□□□ -0.3
SH2D1AO60880 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SH2D1AO60880 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SH2D1AO60880 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SH2D1AO60880 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SH2D1AO60880 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SH2D1AO60880 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC13.19□□□□□ -0.3
SH2D1AO60880 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SH2D1AO60880 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SH2D1AO60880 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SH2D1AO60880 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SH2D1AO60880 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SH2D1AO60880 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SH2D1AO60880 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SH2D1AO60880 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
SH2D1AO60880 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
SH2D1AO60880 MED29-202ENST00000594368 1471 ntTSL 2 BASIC13.19□□□□□ -0.3
SH2D1AO60880 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SH2D1AO60880 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC13.19□□□□□ -0.3
SH2D1AO60880 HIST1H2APS4-201ENST00000362070 348 ntBASIC13.19□□□□□ -0.3
SH2D1AO60880 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SH2D1AO60880 BX088651.1-201ENST00000540551 451 ntBASIC13.19□□□□□ -0.3
SH2D1AO60880 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC13.19□□□□□ -0.3
SH2D1AO60880 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SH2D1AO60880 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SH2D1AO60880 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SH2D1AO60880 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SH2D1AO60880 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SH2D1AO60880 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SH2D1AO60880 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SH2D1AO60880 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
SH2D1AO60880 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SH2D1AO60880 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SH2D1AO60880 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC13.19□□□□□ -0.3
SH2D1AO60880 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SH2D1AO60880 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC13.19□□□□□ -0.3
SH2D1AO60880 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
SH2D1AO60880 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
SH2D1AO60880 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
SH2D1AO60880 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
SH2D1AO60880 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SH2D1AO60880 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SH2D1AO60880 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
SH2D1AO60880 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
SH2D1AO60880 CA12-203ENST00000422263 2556 ntTSL 2 BASIC13.19□□□□□ -0.3
SH2D1AO60880 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
SH2D1AO60880 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
SH2D1AO60880 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SH2D1AO60880 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SH2D1AO60880 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
SH2D1AO60880 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC13.18□□□□□ -0.3
SH2D1AO60880 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SH2D1AO60880 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
SH2D1AO60880 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SH2D1AO60880 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC13.18□□□□□ -0.3
SH2D1AO60880 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
SH2D1AO60880 PKD1P5-201ENST00000532415 10291 ntBASIC13.18□□□□□ -0.3
SH2D1AO60880 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SH2D1AO60880 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC13.18□□□□□ -0.3
SH2D1AO60880 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC13.18□□□□□ -0.3
SH2D1AO60880 ID1-201ENST00000376105 1233 ntBASIC13.18□□□□□ -0.3
SH2D1AO60880 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SH2D1AO60880 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SH2D1AO60880 CCR12P-201ENST00000446203 998 ntBASIC13.18□□□□□ -0.3
SH2D1AO60880 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC13.18□□□□□ -0.3
SH2D1AO60880 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SH2D1AO60880 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC13.18□□□□□ -0.3
SH2D1AO60880 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC13.18□□□□□ -0.3
SH2D1AO60880 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC13.18□□□□□ -0.3
SH2D1AO60880 IRX5-204ENST00000560154 879 ntTSL 5 BASIC13.18□□□□□ -0.3
SH2D1AO60880 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SH2D1AO60880 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SH2D1AO60880 AC092666.2-201ENST00000613287 246 ntBASIC13.18□□□□□ -0.3
SH2D1AO60880 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
SH2D1AO60880 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SH2D1AO60880 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
SH2D1AO60880 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
SH2D1AO60880 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC13.18□□□□□ -0.3
SH2D1AO60880 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 56.9 ms