Protein–RNA interactions for Protein: O60337

MARCH6, E3 ubiquitin-protein ligase MARCH6, humanhuman

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MARCH6O60337 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
MARCH6O60337 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC20.12■□□□□ 0.81
MARCH6O60337 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MARCH6O60337 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
MARCH6O60337 AC096582.2-201ENST00000510860 516 ntBASIC20.12■□□□□ 0.81
MARCH6O60337 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MARCH6O60337 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MARCH6O60337 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.12■□□□□ 0.81
MARCH6O60337 AC138894.3-201ENST00000603787 634 ntBASIC20.12■□□□□ 0.81
MARCH6O60337 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC20.12■□□□□ 0.81
MARCH6O60337 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
MARCH6O60337 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
MARCH6O60337 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MARCH6O60337 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
MARCH6O60337 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
MARCH6O60337 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
MARCH6O60337 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
MARCH6O60337 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC20.12■□□□□ 0.81
MARCH6O60337 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC20.12■□□□□ 0.81
MARCH6O60337 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
MARCH6O60337 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
MARCH6O60337 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC20.11■□□□□ 0.81
MARCH6O60337 AC097374.2-201ENST00000618617 1306 ntBASIC20.11■□□□□ 0.81
MARCH6O60337 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
MARCH6O60337 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC20.11■□□□□ 0.81
MARCH6O60337 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
MARCH6O60337 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
MARCH6O60337 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
MARCH6O60337 IGHV3-47-201ENST00000425060 335 ntBASIC20.11■□□□□ 0.81
MARCH6O60337 DDX43P3-201ENST00000441064 443 ntBASIC20.11■□□□□ 0.81
MARCH6O60337 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
MARCH6O60337 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC20.11■□□□□ 0.81
MARCH6O60337 AL138831.2-201ENST00000606564 490 ntBASIC20.11■□□□□ 0.81
MARCH6O60337 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC20.11■□□□□ 0.81
MARCH6O60337 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
MARCH6O60337 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
MARCH6O60337 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
MARCH6O60337 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
MARCH6O60337 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
MARCH6O60337 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC20.11■□□□□ 0.81
MARCH6O60337 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC20.11■□□□□ 0.81
MARCH6O60337 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.1■□□□□ 0.81
MARCH6O60337 STK24-203ENST00000397517 4578 ntTSL 2 BASIC20.1■□□□□ 0.81
MARCH6O60337 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MARCH6O60337 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
MARCH6O60337 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC20.1■□□□□ 0.81
MARCH6O60337 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MARCH6O60337 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
MARCH6O60337 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
MARCH6O60337 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
MARCH6O60337 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC20.1■□□□□ 0.81
MARCH6O60337 GATB-213ENST00000515812 1893 ntTSL 5 BASIC20.1■□□□□ 0.81
MARCH6O60337 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MARCH6O60337 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.1■□□□□ 0.81
MARCH6O60337 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.1■□□□□ 0.81
MARCH6O60337 PRR29-207ENST00000580752 458 ntTSL 3 BASIC20.1■□□□□ 0.81
MARCH6O60337 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.1■□□□□ 0.81
MARCH6O60337 BX276092.7-203ENST00000637198 1536 ntBASIC20.1■□□□□ 0.81
MARCH6O60337 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
MARCH6O60337 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
MARCH6O60337 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC20.1■□□□□ 0.81
MARCH6O60337 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC20.1■□□□□ 0.81
MARCH6O60337 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
MARCH6O60337 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
MARCH6O60337 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.09■□□□□ 0.81
MARCH6O60337 ADM-208ENST00000534464 1640 ntTSL 2 BASIC20.09■□□□□ 0.81
MARCH6O60337 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
MARCH6O60337 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.09■□□□□ 0.81
MARCH6O60337 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
MARCH6O60337 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC20.09■□□□□ 0.81
MARCH6O60337 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
MARCH6O60337 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
MARCH6O60337 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
MARCH6O60337 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MARCH6O60337 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MARCH6O60337 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
MARCH6O60337 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
MARCH6O60337 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MARCH6O60337 NUS1P2-201ENST00000417358 873 ntBASIC20.09■□□□□ 0.81
MARCH6O60337 AC096633.1-201ENST00000422446 749 ntBASIC20.09■□□□□ 0.81
MARCH6O60337 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.09■□□□□ 0.81
MARCH6O60337 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MARCH6O60337 FOSL1P1-201ENST00000511041 816 ntBASIC20.09■□□□□ 0.81
MARCH6O60337 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MARCH6O60337 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC20.09■□□□□ 0.81
MARCH6O60337 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC20.09■□□□□ 0.81
MARCH6O60337 TP73-AS1-210ENST00000637775 1455 ntBASIC20.09■□□□□ 0.81
MARCH6O60337 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
MARCH6O60337 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
MARCH6O60337 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
MARCH6O60337 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MARCH6O60337 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
MARCH6O60337 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
MARCH6O60337 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
MARCH6O60337 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MARCH6O60337 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
MARCH6O60337 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
MARCH6O60337 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
MARCH6O60337 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
MARCH6O60337 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms