Protein–RNA interactions for Protein: O60225

SSX5, Protein SSX5, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX5O60225 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SSX5O60225 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
SSX5O60225 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SSX5O60225 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
SSX5O60225 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC15.13■□□□□ 0.01
SSX5O60225 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SSX5O60225 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SSX5O60225 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.13■□□□□ 0.01
SSX5O60225 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.13■□□□□ 0.01
SSX5O60225 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SSX5O60225 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
SSX5O60225 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
SSX5O60225 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC15.13■□□□□ 0.01
SSX5O60225 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC15.13■□□□□ 0.01
SSX5O60225 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
SSX5O60225 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
SSX5O60225 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SSX5O60225 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
SSX5O60225 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.13■□□□□ 0.01
SSX5O60225 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
SSX5O60225 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SSX5O60225 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC15.13■□□□□ 0.01
SSX5O60225 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SSX5O60225 ILF2-202ENST00000368681 726 ntTSL 2 BASIC15.13■□□□□ 0.01
SSX5O60225 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC15.13■□□□□ 0.01
SSX5O60225 AP003041.3-201ENST00000527151 707 ntBASIC15.13■□□□□ 0.01
SSX5O60225 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
SSX5O60225 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC15.13■□□□□ 0.01
SSX5O60225 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC15.13■□□□□ 0.01
SSX5O60225 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
SSX5O60225 MMD2-204ENST00000612910 778 ntTSL 5 BASIC15.13■□□□□ 0.01
SSX5O60225 AL023803.3-201ENST00000615559 522 ntBASIC15.13■□□□□ 0.01
SSX5O60225 AC112497.1-201ENST00000624824 639 ntBASIC15.13■□□□□ 0.01
SSX5O60225 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC15.13■□□□□ 0.01
SSX5O60225 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
SSX5O60225 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SSX5O60225 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SSX5O60225 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
SSX5O60225 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC15.13■□□□□ 0.01
SSX5O60225 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
SSX5O60225 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SSX5O60225 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
SSX5O60225 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
SSX5O60225 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC15.12■□□□□ 0.01
SSX5O60225 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SSX5O60225 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC15.12■□□□□ 0.01
SSX5O60225 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SSX5O60225 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SSX5O60225 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
SSX5O60225 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
SSX5O60225 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.12■□□□□ 0.01
SSX5O60225 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SSX5O60225 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC15.12■□□□□ 0.01
SSX5O60225 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SSX5O60225 REXO1L11P-201ENST00000620964 1927 ntBASIC15.12■□□□□ 0.01
SSX5O60225 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
SSX5O60225 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SSX5O60225 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SSX5O60225 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SSX5O60225 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SSX5O60225 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SSX5O60225 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SSX5O60225 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.12■□□□□ 0.01
SSX5O60225 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
SSX5O60225 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SSX5O60225 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SSX5O60225 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
SSX5O60225 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC15.12■□□□□ 0.01
SSX5O60225 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC15.12■□□□□ 0.01
SSX5O60225 AC092666.2-201ENST00000613287 246 ntBASIC15.12■□□□□ 0.01
SSX5O60225 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
SSX5O60225 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SSX5O60225 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SSX5O60225 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
SSX5O60225 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SSX5O60225 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SSX5O60225 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
SSX5O60225 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SSX5O60225 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SSX5O60225 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC15.12■□□□□ 0.01
SSX5O60225 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC15.11■□□□□ 0.01
SSX5O60225 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SSX5O60225 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
SSX5O60225 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC15.11■□□□□ 0.01
SSX5O60225 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
SSX5O60225 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.11■□□□□ 0.01
SSX5O60225 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SSX5O60225 AC106886.4-201ENST00000623557 2502 ntBASIC15.11■□□□□ 0.01
SSX5O60225 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC15.11■□□□□ 0.01
SSX5O60225 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SSX5O60225 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.11■□□□□ 0.01
SSX5O60225 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SSX5O60225 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SSX5O60225 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SSX5O60225 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SSX5O60225 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
SSX5O60225 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC15.11■□□□□ 0.01
SSX5O60225 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SSX5O60225 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SSX5O60225 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms