Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
PDE6DO43924 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
PDE6DO43924 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PDE6DO43924 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC13.69□□□□□ -0.22
PDE6DO43924 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PDE6DO43924 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PDE6DO43924 AC092068.3-201ENST00000587894 2016 ntBASIC13.69□□□□□ -0.22
PDE6DO43924 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.69□□□□□ -0.22
PDE6DO43924 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC13.69□□□□□ -0.22
PDE6DO43924 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC13.69□□□□□ -0.22
PDE6DO43924 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PDE6DO43924 AC116353.5-201ENST00000638148 1699 ntBASIC13.69□□□□□ -0.22
PDE6DO43924 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PDE6DO43924 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PDE6DO43924 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
PDE6DO43924 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
PDE6DO43924 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC13.68□□□□□ -0.22
PDE6DO43924 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PDE6DO43924 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PDE6DO43924 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
PDE6DO43924 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC13.68□□□□□ -0.22
PDE6DO43924 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PDE6DO43924 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PDE6DO43924 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
PDE6DO43924 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PDE6DO43924 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PDE6DO43924 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC13.68□□□□□ -0.22
PDE6DO43924 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
PDE6DO43924 AL024508.2-201ENST00000607749 1894 ntBASIC13.68□□□□□ -0.22
PDE6DO43924 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13.68□□□□□ -0.22
PDE6DO43924 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC13.68□□□□□ -0.22
PDE6DO43924 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
PDE6DO43924 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC13.68□□□□□ -0.22
PDE6DO43924 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PDE6DO43924 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PDE6DO43924 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PDE6DO43924 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PDE6DO43924 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC13.68□□□□□ -0.22
PDE6DO43924 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PDE6DO43924 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PDE6DO43924 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PDE6DO43924 RHEB-204ENST00000472642 900 ntTSL 3 BASIC13.68□□□□□ -0.22
PDE6DO43924 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC13.68□□□□□ -0.22
PDE6DO43924 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC13.68□□□□□ -0.22
PDE6DO43924 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PDE6DO43924 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC13.68□□□□□ -0.22
PDE6DO43924 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PDE6DO43924 AC008622.2-201ENST00000617006 1229 ntBASIC13.68□□□□□ -0.22
PDE6DO43924 AL050303.2-201ENST00000619798 666 ntBASIC13.68□□□□□ -0.22
PDE6DO43924 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PDE6DO43924 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
PDE6DO43924 SHISA9-203ENST00000558583 6724 ntAPPRIS P4 TSL 5 BASIC13.68□□□□□ -0.22
PDE6DO43924 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PDE6DO43924 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PDE6DO43924 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC13.68□□□□□ -0.22
PDE6DO43924 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PDE6DO43924 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PDE6DO43924 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PDE6DO43924 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC13.68□□□□□ -0.22
PDE6DO43924 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC13.68□□□□□ -0.22
PDE6DO43924 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
PDE6DO43924 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
PDE6DO43924 AC007950.2-201ENST00000615045 2347 ntBASIC13.68□□□□□ -0.22
PDE6DO43924 ANKRD26P3-201ENST00000454044 2748 ntBASIC13.68□□□□□ -0.22
PDE6DO43924 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
PDE6DO43924 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC13.68□□□□□ -0.22
PDE6DO43924 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
PDE6DO43924 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
PDE6DO43924 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
PDE6DO43924 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PDE6DO43924 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
PDE6DO43924 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PDE6DO43924 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC13.67□□□□□ -0.22
PDE6DO43924 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC13.67□□□□□ -0.22
PDE6DO43924 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PDE6DO43924 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC13.67□□□□□ -0.22
PDE6DO43924 KRT8P7-201ENST00000533003 1432 ntBASIC13.67□□□□□ -0.22
PDE6DO43924 AC132938.6-201ENST00000623828 1655 ntBASIC13.67□□□□□ -0.22
PDE6DO43924 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PDE6DO43924 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PDE6DO43924 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PDE6DO43924 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PDE6DO43924 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PDE6DO43924 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PDE6DO43924 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PDE6DO43924 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC13.67□□□□□ -0.22
PDE6DO43924 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC13.67□□□□□ -0.22
PDE6DO43924 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PDE6DO43924 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC13.67□□□□□ -0.22
PDE6DO43924 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PDE6DO43924 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC13.67□□□□□ -0.22
PDE6DO43924 NAT14-202ENST00000587400 416 ntTSL 5 BASIC13.67□□□□□ -0.22
PDE6DO43924 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC13.67□□□□□ -0.22
PDE6DO43924 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC13.67□□□□□ -0.22
PDE6DO43924 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC13.67□□□□□ -0.22
PDE6DO43924 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PDE6DO43924 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC13.67□□□□□ -0.22
PDE6DO43924 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PDE6DO43924 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
PDE6DO43924 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms