Protein–RNA interactions for Protein: O43900

PRICKLE3, Prickle planar cell polarity protein 3, humanhuman

Predicted RBP Predictions only

Length 615 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE3O43900 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRICKLE3O43900 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRICKLE3O43900 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
PRICKLE3O43900 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRICKLE3O43900 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.9■□□□□ 0.3
PRICKLE3O43900 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.9■□□□□ 0.3
PRICKLE3O43900 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRICKLE3O43900 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
PRICKLE3O43900 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
PRICKLE3O43900 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
PRICKLE3O43900 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PRICKLE3O43900 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PRICKLE3O43900 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.89■□□□□ 0.29
PRICKLE3O43900 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRICKLE3O43900 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRICKLE3O43900 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.89■□□□□ 0.29
PRICKLE3O43900 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRICKLE3O43900 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PRICKLE3O43900 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PRICKLE3O43900 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC16.89■□□□□ 0.29
PRICKLE3O43900 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
PRICKLE3O43900 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
PRICKLE3O43900 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC16.89■□□□□ 0.29
PRICKLE3O43900 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
PRICKLE3O43900 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.89■□□□□ 0.29
PRICKLE3O43900 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PRICKLE3O43900 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
PRICKLE3O43900 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.89■□□□□ 0.29
PRICKLE3O43900 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
PRICKLE3O43900 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.89■□□□□ 0.29
PRICKLE3O43900 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC16.89■□□□□ 0.29
PRICKLE3O43900 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PRICKLE3O43900 AL139327.4-201ENST00000612362 153 ntBASIC16.89■□□□□ 0.29
PRICKLE3O43900 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.89■□□□□ 0.29
PRICKLE3O43900 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.89■□□□□ 0.29
PRICKLE3O43900 AC090340.1-201ENST00000620778 4980 ntBASIC16.89■□□□□ 0.29
PRICKLE3O43900 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRICKLE3O43900 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
PRICKLE3O43900 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRICKLE3O43900 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.89■□□□□ 0.29
PRICKLE3O43900 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRICKLE3O43900 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRICKLE3O43900 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
PRICKLE3O43900 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.89■□□□□ 0.29
PRICKLE3O43900 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.88■□□□□ 0.29
PRICKLE3O43900 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PRICKLE3O43900 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.88■□□□□ 0.29
PRICKLE3O43900 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.88■□□□□ 0.29
PRICKLE3O43900 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PRICKLE3O43900 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
PRICKLE3O43900 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PRICKLE3O43900 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
PRICKLE3O43900 AC003669.1-201ENST00000334569 611 ntBASIC16.88■□□□□ 0.29
PRICKLE3O43900 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PRICKLE3O43900 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
PRICKLE3O43900 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRICKLE3O43900 PRYP5-201ENST00000451909 266 ntBASIC16.88■□□□□ 0.29
PRICKLE3O43900 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.88■□□□□ 0.29
PRICKLE3O43900 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.88■□□□□ 0.29
PRICKLE3O43900 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.88■□□□□ 0.29
PRICKLE3O43900 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.88■□□□□ 0.29
PRICKLE3O43900 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PRICKLE3O43900 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PRICKLE3O43900 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.88■□□□□ 0.29
PRICKLE3O43900 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC16.88■□□□□ 0.29
PRICKLE3O43900 NKAPP1-205ENST00000585790 367 ntBASIC16.88■□□□□ 0.29
PRICKLE3O43900 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.88■□□□□ 0.29
PRICKLE3O43900 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRICKLE3O43900 TP73-AS1-207ENST00000624167 988 ntBASIC16.88■□□□□ 0.29
PRICKLE3O43900 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRICKLE3O43900 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PRICKLE3O43900 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRICKLE3O43900 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC16.88■□□□□ 0.29
PRICKLE3O43900 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRICKLE3O43900 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC16.88■□□□□ 0.29
PRICKLE3O43900 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
PRICKLE3O43900 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRICKLE3O43900 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
PRICKLE3O43900 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.88■□□□□ 0.29
PRICKLE3O43900 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
PRICKLE3O43900 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRICKLE3O43900 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRICKLE3O43900 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRICKLE3O43900 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRICKLE3O43900 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
PRICKLE3O43900 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRICKLE3O43900 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PRICKLE3O43900 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRICKLE3O43900 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PRICKLE3O43900 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.87■□□□□ 0.29
PRICKLE3O43900 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.87■□□□□ 0.29
PRICKLE3O43900 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRICKLE3O43900 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRICKLE3O43900 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRICKLE3O43900 AC009336.1-201ENST00000608941 1553 ntBASIC16.87■□□□□ 0.29
PRICKLE3O43900 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRICKLE3O43900 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRICKLE3O43900 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
PRICKLE3O43900 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PRICKLE3O43900 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms