Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP2AO43633 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.82■□□□□ 0.76
CHMP2AO43633 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP2AO43633 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP2AO43633 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CHMP2AO43633 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CHMP2AO43633 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC19.81■□□□□ 0.76
CHMP2AO43633 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP2AO43633 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP2AO43633 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP2AO43633 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP2AO43633 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP2AO43633 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP2AO43633 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CHMP2AO43633 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP2AO43633 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP2AO43633 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC19.81■□□□□ 0.76
CHMP2AO43633 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP2AO43633 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC19.81■□□□□ 0.76
CHMP2AO43633 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP2AO43633 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.81■□□□□ 0.76
CHMP2AO43633 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC19.81■□□□□ 0.76
CHMP2AO43633 REXO1L11P-201ENST00000620964 1927 ntBASIC19.81■□□□□ 0.76
CHMP2AO43633 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP2AO43633 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.81■□□□□ 0.76
CHMP2AO43633 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP2AO43633 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.81■□□□□ 0.76
CHMP2AO43633 AC103564.2-201ENST00000432853 1299 ntBASIC19.81■□□□□ 0.76
CHMP2AO43633 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.81■□□□□ 0.76
CHMP2AO43633 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CHMP2AO43633 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC19.81■□□□□ 0.76
CHMP2AO43633 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.81■□□□□ 0.76
CHMP2AO43633 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP2AO43633 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC19.81■□□□□ 0.76
CHMP2AO43633 AD001527.2-201ENST00000622994 785 ntBASIC19.81■□□□□ 0.76
CHMP2AO43633 AP000867.4-201ENST00000641616 219 ntBASIC19.81■□□□□ 0.76
CHMP2AO43633 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.81■□□□□ 0.76
CHMP2AO43633 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC19.81■□□□□ 0.76
CHMP2AO43633 AL049757.1-201ENST00000616842 1596 ntBASIC19.81■□□□□ 0.76
CHMP2AO43633 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.81■□□□□ 0.76
CHMP2AO43633 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CHMP2AO43633 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP2AO43633 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP2AO43633 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP2AO43633 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.8■□□□□ 0.76
CHMP2AO43633 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC19.8■□□□□ 0.76
CHMP2AO43633 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CHMP2AO43633 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP2AO43633 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP2AO43633 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC19.8■□□□□ 0.76
CHMP2AO43633 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP2AO43633 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
CHMP2AO43633 AC006116.8-202ENST00000587620 1550 ntBASIC19.8■□□□□ 0.76
CHMP2AO43633 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.8■□□□□ 0.76
CHMP2AO43633 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP2AO43633 MRPL3P1-201ENST00000400109 1033 ntBASIC19.8■□□□□ 0.76
CHMP2AO43633 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC19.8■□□□□ 0.76
CHMP2AO43633 FAM197Y8-203ENST00000450145 560 ntBASIC19.8■□□□□ 0.76
CHMP2AO43633 SART3-203ENST00000546611 1184 ntBASIC19.8■□□□□ 0.76
CHMP2AO43633 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
CHMP2AO43633 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CHMP2AO43633 AC073592.5-201ENST00000624854 528 ntBASIC19.8■□□□□ 0.76
CHMP2AO43633 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.8■□□□□ 0.76
CHMP2AO43633 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP2AO43633 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CHMP2AO43633 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
CHMP2AO43633 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP2AO43633 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CHMP2AO43633 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHMP2AO43633 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CHMP2AO43633 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHMP2AO43633 PMPCAP1-201ENST00000508114 1576 ntBASIC19.79■□□□□ 0.76
CHMP2AO43633 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHMP2AO43633 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHMP2AO43633 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC19.79■□□□□ 0.76
CHMP2AO43633 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC19.79■□□□□ 0.76
CHMP2AO43633 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CHMP2AO43633 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHMP2AO43633 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHMP2AO43633 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHMP2AO43633 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CHMP2AO43633 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CHMP2AO43633 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.79■□□□□ 0.76
CHMP2AO43633 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.79■□□□□ 0.76
CHMP2AO43633 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC19.79■□□□□ 0.76
CHMP2AO43633 BX005266.1-201ENST00000473402 457 ntBASIC19.79■□□□□ 0.76
CHMP2AO43633 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC19.79■□□□□ 0.76
CHMP2AO43633 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.79■□□□□ 0.76
CHMP2AO43633 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.79■□□□□ 0.76
CHMP2AO43633 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHMP2AO43633 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHMP2AO43633 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHMP2AO43633 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.79■□□□□ 0.76
CHMP2AO43633 VPS51-217ENST00000639871 243 ntTSL 5 BASIC19.79■□□□□ 0.76
CHMP2AO43633 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC19.79■□□□□ 0.76
CHMP2AO43633 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CHMP2AO43633 AC004817.3-201ENST00000602957 2129 ntBASIC19.79■□□□□ 0.76
CHMP2AO43633 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CHMP2AO43633 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC19.79■□□□□ 0.76
CHMP2AO43633 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms