Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.63■□□□□ 0.09
SGCEO43556 AC112698.1-201ENST00000510299 916 ntBASIC15.63■□□□□ 0.09
SGCEO43556 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.63■□□□□ 0.09
SGCEO43556 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC15.63■□□□□ 0.09
SGCEO43556 NME3-204ENST00000563498 920 ntTSL 2 BASIC15.63■□□□□ 0.09
SGCEO43556 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC15.63■□□□□ 0.09
SGCEO43556 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
SGCEO43556 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SGCEO43556 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SGCEO43556 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.63■□□□□ 0.09
SGCEO43556 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SGCEO43556 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SGCEO43556 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC15.63■□□□□ 0.09
SGCEO43556 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SGCEO43556 UBC-206ENST00000538617 1303 ntTSL 5 BASIC15.63■□□□□ 0.09
SGCEO43556 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC15.63■□□□□ 0.09
SGCEO43556 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
SGCEO43556 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
SGCEO43556 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC15.63■□□□□ 0.09
SGCEO43556 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SGCEO43556 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
SGCEO43556 KRT8P47-201ENST00000604727 1398 ntBASIC15.62■□□□□ 0.09
SGCEO43556 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
SGCEO43556 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
SGCEO43556 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC15.62■□□□□ 0.09
SGCEO43556 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.62■□□□□ 0.09
SGCEO43556 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
SGCEO43556 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SGCEO43556 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
SGCEO43556 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.62■□□□□ 0.09
SGCEO43556 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC15.62■□□□□ 0.09
SGCEO43556 AL136038.3-201ENST00000561909 1096 ntBASIC15.62■□□□□ 0.09
SGCEO43556 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC15.62■□□□□ 0.09
SGCEO43556 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC15.62■□□□□ 0.09
SGCEO43556 NTF6B-201ENST00000591913 560 ntBASIC15.62■□□□□ 0.09
SGCEO43556 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.62■□□□□ 0.09
SGCEO43556 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SGCEO43556 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SGCEO43556 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
SGCEO43556 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
SGCEO43556 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SGCEO43556 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SGCEO43556 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SGCEO43556 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SGCEO43556 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
SGCEO43556 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
SGCEO43556 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.62■□□□□ 0.09
SGCEO43556 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
SGCEO43556 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.62■□□□□ 0.09
SGCEO43556 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
SGCEO43556 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC15.62■□□□□ 0.09
SGCEO43556 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
SGCEO43556 AC009949.1-201ENST00000623048 1830 ntBASIC15.61■□□□□ 0.09
SGCEO43556 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC15.61■□□□□ 0.09
SGCEO43556 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SGCEO43556 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SGCEO43556 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.61■□□□□ 0.09
SGCEO43556 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.61■□□□□ 0.09
SGCEO43556 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.61■□□□□ 0.09
SGCEO43556 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SGCEO43556 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SGCEO43556 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
SGCEO43556 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.61■□□□□ 0.09
SGCEO43556 MED29-202ENST00000594368 1471 ntTSL 2 BASIC15.61■□□□□ 0.09
SGCEO43556 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC15.61■□□□□ 0.09
SGCEO43556 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
SGCEO43556 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.61■□□□□ 0.09
SGCEO43556 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SGCEO43556 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SGCEO43556 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC15.61■□□□□ 0.09
SGCEO43556 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC15.61■□□□□ 0.09
SGCEO43556 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SGCEO43556 TSPY22P-201ENST00000427496 604 ntBASIC15.61■□□□□ 0.09
SGCEO43556 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC15.61■□□□□ 0.09
SGCEO43556 MTCL1P1-201ENST00000446207 792 ntBASIC15.61■□□□□ 0.09
SGCEO43556 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC15.61■□□□□ 0.09
SGCEO43556 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
SGCEO43556 AL590326.2-201ENST00000625139 305 ntBASIC15.61■□□□□ 0.09
SGCEO43556 AL121956.5-201ENST00000625261 221 ntBASIC15.61■□□□□ 0.09
SGCEO43556 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SGCEO43556 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SGCEO43556 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.61■□□□□ 0.09
SGCEO43556 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
SGCEO43556 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC15.61■□□□□ 0.09
SGCEO43556 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
SGCEO43556 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SGCEO43556 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SGCEO43556 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
SGCEO43556 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
SGCEO43556 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC15.61■□□□□ 0.09
SGCEO43556 LINC00896-202ENST00000609602 2128 ntBASIC15.61■□□□□ 0.09
SGCEO43556 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
SGCEO43556 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
SGCEO43556 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
SGCEO43556 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.6■□□□□ 0.09
SGCEO43556 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
SGCEO43556 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SGCEO43556 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC15.6■□□□□ 0.09
SGCEO43556 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC15.6■□□□□ 0.09
SGCEO43556 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms