Protein–RNA interactions for Protein: O15534

PER1, Period circadian protein homolog 1, humanhuman

Predicted RBP Predictions only

Length 1,290 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER1O15534 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PER1O15534 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC23.82■■□□□ 1.4
PER1O15534 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PER1O15534 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
PER1O15534 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
PER1O15534 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PER1O15534 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PER1O15534 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
PER1O15534 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PER1O15534 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PER1O15534 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
PER1O15534 AC116353.5-201ENST00000638148 1699 ntBASIC23.81■■□□□ 1.4
PER1O15534 KRT18P67-201ENST00000432816 1264 ntBASIC23.81■■□□□ 1.4
PER1O15534 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC23.81■■□□□ 1.4
PER1O15534 IRF8-202ENST00000562492 946 ntTSL 3 BASIC23.81■■□□□ 1.4
PER1O15534 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
PER1O15534 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PER1O15534 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC23.81■■□□□ 1.4
PER1O15534 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC23.81■■□□□ 1.4
PER1O15534 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
PER1O15534 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
PER1O15534 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PER1O15534 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
PER1O15534 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PER1O15534 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC23.8■■□□□ 1.4
PER1O15534 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PER1O15534 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
PER1O15534 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC23.8■■□□□ 1.4
PER1O15534 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
PER1O15534 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PER1O15534 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC23.8■■□□□ 1.4
PER1O15534 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC23.8■■□□□ 1.4
PER1O15534 SCARNA2-201ENST00000458748 420 ntBASIC23.8■■□□□ 1.4
PER1O15534 AC108860.2-201ENST00000562760 2183 ntBASIC23.8■■□□□ 1.4
PER1O15534 PNMT-203ENST00000581428 677 ntTSL 2 BASIC23.8■■□□□ 1.4
PER1O15534 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC23.8■■□□□ 1.4
PER1O15534 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PER1O15534 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PER1O15534 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
PER1O15534 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
PER1O15534 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC23.79■■□□□ 1.4
PER1O15534 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC23.79■■□□□ 1.4
PER1O15534 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
PER1O15534 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
PER1O15534 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC23.79■■□□□ 1.4
PER1O15534 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC23.79■■□□□ 1.4
PER1O15534 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC23.79■■□□□ 1.4
PER1O15534 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC23.79■■□□□ 1.4
PER1O15534 AC016396.2-201ENST00000562575 1417 ntBASIC23.79■■□□□ 1.4
PER1O15534 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC23.79■■□□□ 1.4
PER1O15534 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PER1O15534 HIST2H3DP1-201ENST00000401004 416 ntBASIC23.79■■□□□ 1.4
PER1O15534 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
PER1O15534 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC23.79■■□□□ 1.4
PER1O15534 AC012640.2-201ENST00000561606 901 ntBASIC23.79■■□□□ 1.4
PER1O15534 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC23.79■■□□□ 1.4
PER1O15534 RNF151-202ENST00000569210 853 ntTSL 2 BASIC23.79■■□□□ 1.4
PER1O15534 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC23.79■■□□□ 1.4
PER1O15534 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC23.79■■□□□ 1.4
PER1O15534 AC107918.4-202ENST00000641623 219 ntBASIC23.79■■□□□ 1.4
PER1O15534 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
PER1O15534 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC23.79■■□□□ 1.4
PER1O15534 HLA-A-201ENST00000376802 1334 ntBASIC23.79■■□□□ 1.4
PER1O15534 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
PER1O15534 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC23.79■■□□□ 1.4
PER1O15534 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
PER1O15534 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PER1O15534 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
PER1O15534 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PER1O15534 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PER1O15534 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PER1O15534 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PER1O15534 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC23.78■■□□□ 1.4
PER1O15534 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC23.78■■□□□ 1.4
PER1O15534 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC23.78■■□□□ 1.4
PER1O15534 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC23.78■■□□□ 1.4
PER1O15534 AL049840.3-201ENST00000602669 611 ntBASIC23.78■■□□□ 1.4
PER1O15534 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
PER1O15534 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
PER1O15534 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC23.78■■□□□ 1.4
PER1O15534 BANP-227ENST00000626016 2144 ntTSL 2 BASIC23.78■■□□□ 1.4
PER1O15534 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PER1O15534 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PER1O15534 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC23.78■■□□□ 1.4
PER1O15534 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PER1O15534 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
PER1O15534 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC23.77■■□□□ 1.4
PER1O15534 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC23.77■■□□□ 1.4
PER1O15534 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PER1O15534 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
PER1O15534 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
PER1O15534 MED22-202ENST00000371999 987 ntTSL 3 BASIC23.77■■□□□ 1.4
PER1O15534 KRT18P27-201ENST00000427733 1299 ntBASIC23.77■■□□□ 1.4
PER1O15534 RPS2P1-201ENST00000434010 821 ntBASIC23.77■■□□□ 1.4
PER1O15534 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC23.77■■□□□ 1.4
PER1O15534 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC23.77■■□□□ 1.4
PER1O15534 MOK-208ENST00000519058 917 ntTSL 2 BASIC23.77■■□□□ 1.4
PER1O15534 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
PER1O15534 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC23.77■■□□□ 1.4
PER1O15534 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms