Protein–RNA interactions for Protein: O15260

SURF4, Surfeit locus protein 4, humanhuman

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SURF4O15260 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
SURF4O15260 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SURF4O15260 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SURF4O15260 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SURF4O15260 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SURF4O15260 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SURF4O15260 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.14
SURF4O15260 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.93■□□□□ 0.14
SURF4O15260 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC15.93■□□□□ 0.14
SURF4O15260 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
SURF4O15260 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
SURF4O15260 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SURF4O15260 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC15.92■□□□□ 0.14
SURF4O15260 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SURF4O15260 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SURF4O15260 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC15.92■□□□□ 0.14
SURF4O15260 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SURF4O15260 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SURF4O15260 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC15.92■□□□□ 0.14
SURF4O15260 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC15.92■□□□□ 0.14
SURF4O15260 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC15.92■□□□□ 0.14
SURF4O15260 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SURF4O15260 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SURF4O15260 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
SURF4O15260 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SURF4O15260 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SURF4O15260 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
SURF4O15260 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SURF4O15260 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SURF4O15260 PPOX-219ENST00000544598 813 ntTSL 2 BASIC15.92■□□□□ 0.14
SURF4O15260 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC15.92■□□□□ 0.14
SURF4O15260 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC15.92■□□□□ 0.14
SURF4O15260 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SURF4O15260 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SURF4O15260 AL031432.5-201ENST00000641059 760 ntBASIC15.92■□□□□ 0.14
SURF4O15260 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SURF4O15260 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
SURF4O15260 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
SURF4O15260 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SURF4O15260 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
SURF4O15260 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
SURF4O15260 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
SURF4O15260 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
SURF4O15260 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC15.92■□□□□ 0.14
SURF4O15260 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
SURF4O15260 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC15.91■□□□□ 0.14
SURF4O15260 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC15.91■□□□□ 0.14
SURF4O15260 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
SURF4O15260 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
SURF4O15260 LGALS8-AS1-201ENST00000487567 1457 ntBASIC15.91■□□□□ 0.14
SURF4O15260 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SURF4O15260 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
SURF4O15260 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SURF4O15260 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SURF4O15260 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SURF4O15260 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.91■□□□□ 0.14
SURF4O15260 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.91■□□□□ 0.14
SURF4O15260 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
SURF4O15260 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC15.91■□□□□ 0.14
SURF4O15260 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SURF4O15260 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
SURF4O15260 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SURF4O15260 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
SURF4O15260 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.91■□□□□ 0.14
SURF4O15260 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC15.91■□□□□ 0.14
SURF4O15260 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SURF4O15260 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC15.91■□□□□ 0.14
SURF4O15260 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC15.91■□□□□ 0.14
SURF4O15260 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
SURF4O15260 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC15.91■□□□□ 0.14
SURF4O15260 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
SURF4O15260 AC116353.5-201ENST00000638148 1699 ntBASIC15.91■□□□□ 0.14
SURF4O15260 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SURF4O15260 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SURF4O15260 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SURF4O15260 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
SURF4O15260 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
SURF4O15260 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
SURF4O15260 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.91■□□□□ 0.14
SURF4O15260 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
SURF4O15260 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
SURF4O15260 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SURF4O15260 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SURF4O15260 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SURF4O15260 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.9■□□□□ 0.14
SURF4O15260 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.9■□□□□ 0.14
SURF4O15260 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SURF4O15260 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SURF4O15260 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SURF4O15260 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SURF4O15260 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SURF4O15260 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
SURF4O15260 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SURF4O15260 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
SURF4O15260 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SURF4O15260 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SURF4O15260 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SURF4O15260 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
SURF4O15260 BX664615.1-201ENST00000443558 458 ntBASIC15.9■□□□□ 0.14
SURF4O15260 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms