Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NPIPA3F8WFD2 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.07■□□□□ 0.16
NPIPA3F8WFD2 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPIPA3F8WFD2 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
NPIPA3F8WFD2 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NPIPA3F8WFD2 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.06■□□□□ 0.16
NPIPA3F8WFD2 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.06■□□□□ 0.16
NPIPA3F8WFD2 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.06■□□□□ 0.16
NPIPA3F8WFD2 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPIPA3F8WFD2 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC16.06■□□□□ 0.16
NPIPA3F8WFD2 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.06■□□□□ 0.16
NPIPA3F8WFD2 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
NPIPA3F8WFD2 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPIPA3F8WFD2 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NPIPA3F8WFD2 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPIPA3F8WFD2 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPIPA3F8WFD2 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPIPA3F8WFD2 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
NPIPA3F8WFD2 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPIPA3F8WFD2 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
NPIPA3F8WFD2 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NPIPA3F8WFD2 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
NPIPA3F8WFD2 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.06■□□□□ 0.16
NPIPA3F8WFD2 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.06■□□□□ 0.16
NPIPA3F8WFD2 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.06■□□□□ 0.16
NPIPA3F8WFD2 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
NPIPA3F8WFD2 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPIPA3F8WFD2 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPIPA3F8WFD2 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPIPA3F8WFD2 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPIPA3F8WFD2 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPIPA3F8WFD2 IL9RP2-201ENST00000423948 1312 ntBASIC16.06■□□□□ 0.16
NPIPA3F8WFD2 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC16.06■□□□□ 0.16
NPIPA3F8WFD2 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPIPA3F8WFD2 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.06■□□□□ 0.16
NPIPA3F8WFD2 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
NPIPA3F8WFD2 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.06■□□□□ 0.16
NPIPA3F8WFD2 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPIPA3F8WFD2 RNA5SP419-201ENST00000515908 135 ntBASIC16.06■□□□□ 0.16
NPIPA3F8WFD2 DUTP2-201ENST00000519164 463 ntBASIC16.06■□□□□ 0.16
NPIPA3F8WFD2 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.06■□□□□ 0.16
NPIPA3F8WFD2 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.06■□□□□ 0.16
NPIPA3F8WFD2 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.06■□□□□ 0.16
NPIPA3F8WFD2 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.06■□□□□ 0.16
NPIPA3F8WFD2 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.06■□□□□ 0.16
NPIPA3F8WFD2 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPIPA3F8WFD2 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
NPIPA3F8WFD2 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPIPA3F8WFD2 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
NPIPA3F8WFD2 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
NPIPA3F8WFD2 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPIPA3F8WFD2 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
NPIPA3F8WFD2 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPIPA3F8WFD2 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NPIPA3F8WFD2 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.06■□□□□ 0.16
NPIPA3F8WFD2 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
NPIPA3F8WFD2 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.05■□□□□ 0.16
NPIPA3F8WFD2 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPIPA3F8WFD2 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPIPA3F8WFD2 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.05■□□□□ 0.16
NPIPA3F8WFD2 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NPIPA3F8WFD2 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPIPA3F8WFD2 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
NPIPA3F8WFD2 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.05■□□□□ 0.16
NPIPA3F8WFD2 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.05■□□□□ 0.16
NPIPA3F8WFD2 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPIPA3F8WFD2 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
NPIPA3F8WFD2 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.05■□□□□ 0.16
NPIPA3F8WFD2 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPIPA3F8WFD2 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.05■□□□□ 0.16
NPIPA3F8WFD2 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.05■□□□□ 0.16
NPIPA3F8WFD2 AP005117.1-201ENST00000584346 1413 ntBASIC16.05■□□□□ 0.16
NPIPA3F8WFD2 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
NPIPA3F8WFD2 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
NPIPA3F8WFD2 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPIPA3F8WFD2 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPIPA3F8WFD2 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.05■□□□□ 0.16
NPIPA3F8WFD2 ABCD1P5-201ENST00000445663 754 ntBASIC16.05■□□□□ 0.16
NPIPA3F8WFD2 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.05■□□□□ 0.16
NPIPA3F8WFD2 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.05■□□□□ 0.16
NPIPA3F8WFD2 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NPIPA3F8WFD2 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.05■□□□□ 0.16
NPIPA3F8WFD2 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
NPIPA3F8WFD2 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.05■□□□□ 0.16
NPIPA3F8WFD2 AF228730.7-201ENST00000641842 219 ntBASIC16.05■□□□□ 0.16
NPIPA3F8WFD2 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.05■□□□□ 0.16
NPIPA3F8WFD2 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPIPA3F8WFD2 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NPIPA3F8WFD2 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPIPA3F8WFD2 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.05■□□□□ 0.16
NPIPA3F8WFD2 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.05■□□□□ 0.16
NPIPA3F8WFD2 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.05■□□□□ 0.16
NPIPA3F8WFD2 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC16.05■□□□□ 0.16
NPIPA3F8WFD2 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
NPIPA3F8WFD2 AC018470.1-201ENST00000624790 3129 ntBASIC16.05■□□□□ 0.16
NPIPA3F8WFD2 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPIPA3F8WFD2 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.05■□□□□ 0.16
NPIPA3F8WFD2 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NPIPA3F8WFD2 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.05■□□□□ 0.16
NPIPA3F8WFD2 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms