Protein–RNA interactions for Protein: E9PGA6

C1QTNF3-AMACR, C1QTNF3-AMACR readthrough (NMD candidate), humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C1QTNF3-AMACRE9PGA6 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC17.62■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC17.62■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC17.62■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.62■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 AL356488.2-201ENST00000602755 427 ntBASIC17.62■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 AL671883.3-201ENST00000603274 991 ntBASIC17.62■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 Z83851.2-201ENST00000609564 659 ntBASIC17.62■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 AC117500.6-201ENST00000624871 588 ntBASIC17.62■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.62■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.62■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.62■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC17.62■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 AC009336.1-201ENST00000608941 1553 ntBASIC17.62■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.61■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC17.61■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.61■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.61■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 CENPM-204ENST00000402420 688 ntTSL 5 BASIC17.61■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 MOGAT1-201ENST00000446656 1048 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 AC136632.2-201ENST00000512891 861 ntBASIC17.61■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC17.61■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.61■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 CYB561-217ENST00000582997 877 ntTSL 5 BASIC17.61■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC17.61■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.61■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.61■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.61■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.6■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.6■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 KRT18P27-201ENST00000427733 1299 ntBASIC17.6■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.6■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 CYGB-205ENST00000590175 830 ntTSL 3 BASIC17.6■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC17.6■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 TERC-201ENST00000602385 541 ntBASIC17.6■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 AC004706.3-202ENST00000621574 984 ntBASIC17.6■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.6■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.6■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
C1QTNF3-AMACRE9PGA6 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms