Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TMEM88BA6NKF7 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TMEM88BA6NKF7 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TMEM88BA6NKF7 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMEM88BA6NKF7 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC20.27■□□□□ 0.84
TMEM88BA6NKF7 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMEM88BA6NKF7 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMEM88BA6NKF7 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.27■□□□□ 0.84
TMEM88BA6NKF7 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TMEM88BA6NKF7 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC20.27■□□□□ 0.84
TMEM88BA6NKF7 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMEM88BA6NKF7 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TMEM88BA6NKF7 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMEM88BA6NKF7 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMEM88BA6NKF7 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC20.27■□□□□ 0.84
TMEM88BA6NKF7 DUTP2-201ENST00000519164 463 ntBASIC20.27■□□□□ 0.84
TMEM88BA6NKF7 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC20.27■□□□□ 0.84
TMEM88BA6NKF7 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC20.27■□□□□ 0.84
TMEM88BA6NKF7 MIR4453-201ENST00000584019 89 ntBASIC20.27■□□□□ 0.84
TMEM88BA6NKF7 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMEM88BA6NKF7 IGHV3-72-202ENST00000621503 303 ntBASIC20.27■□□□□ 0.84
TMEM88BA6NKF7 PCDHAC2-203ENST00000615316 3011 ntBASIC20.27■□□□□ 0.84
TMEM88BA6NKF7 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
TMEM88BA6NKF7 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
TMEM88BA6NKF7 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC20.27■□□□□ 0.84
TMEM88BA6NKF7 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TMEM88BA6NKF7 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
TMEM88BA6NKF7 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TMEM88BA6NKF7 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC20.27■□□□□ 0.83
TMEM88BA6NKF7 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
TMEM88BA6NKF7 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.83
TMEM88BA6NKF7 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC20.27■□□□□ 0.83
TMEM88BA6NKF7 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
TMEM88BA6NKF7 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM88BA6NKF7 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC20.26■□□□□ 0.83
TMEM88BA6NKF7 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM88BA6NKF7 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC20.26■□□□□ 0.83
TMEM88BA6NKF7 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM88BA6NKF7 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM88BA6NKF7 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
TMEM88BA6NKF7 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TMEM88BA6NKF7 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM88BA6NKF7 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM88BA6NKF7 MIR658-201ENST00000385210 100 ntBASIC20.26■□□□□ 0.83
TMEM88BA6NKF7 AC079776.1-201ENST00000401540 1152 ntBASIC20.26■□□□□ 0.83
TMEM88BA6NKF7 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC20.26■□□□□ 0.83
TMEM88BA6NKF7 REEP4-207ENST00000523293 913 ntTSL 3 BASIC20.26■□□□□ 0.83
TMEM88BA6NKF7 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC20.26■□□□□ 0.83
TMEM88BA6NKF7 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
TMEM88BA6NKF7 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
TMEM88BA6NKF7 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC20.26■□□□□ 0.83
TMEM88BA6NKF7 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC20.26■□□□□ 0.83
TMEM88BA6NKF7 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TMEM88BA6NKF7 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.26■□□□□ 0.83
TMEM88BA6NKF7 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
TMEM88BA6NKF7 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC20.26■□□□□ 0.83
TMEM88BA6NKF7 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM88BA6NKF7 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC20.26■□□□□ 0.83
TMEM88BA6NKF7 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TMEM88BA6NKF7 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMEM88BA6NKF7 AL161938.1-201ENST00000569833 2180 ntBASIC20.25■□□□□ 0.83
TMEM88BA6NKF7 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
TMEM88BA6NKF7 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMEM88BA6NKF7 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TMEM88BA6NKF7 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC20.25■□□□□ 0.83
TMEM88BA6NKF7 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC20.25■□□□□ 0.83
TMEM88BA6NKF7 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC20.25■□□□□ 0.83
TMEM88BA6NKF7 TMPRSS11CP-201ENST00000453277 683 ntBASIC20.25■□□□□ 0.83
TMEM88BA6NKF7 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TMEM88BA6NKF7 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TMEM88BA6NKF7 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC20.25■□□□□ 0.83
TMEM88BA6NKF7 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC20.25■□□□□ 0.83
TMEM88BA6NKF7 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC20.25■□□□□ 0.83
TMEM88BA6NKF7 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC20.25■□□□□ 0.83
TMEM88BA6NKF7 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMEM88BA6NKF7 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
TMEM88BA6NKF7 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMEM88BA6NKF7 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TMEM88BA6NKF7 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TMEM88BA6NKF7 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM88BA6NKF7 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM88BA6NKF7 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM88BA6NKF7 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM88BA6NKF7 ESPNP-201ENST00000270691 2015 ntBASIC20.24■□□□□ 0.83
TMEM88BA6NKF7 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
TMEM88BA6NKF7 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM88BA6NKF7 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM88BA6NKF7 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM88BA6NKF7 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC20.24■□□□□ 0.83
TMEM88BA6NKF7 INE1-201ENST00000456273 945 ntBASIC20.24■□□□□ 0.83
TMEM88BA6NKF7 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM88BA6NKF7 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC20.24■□□□□ 0.83
TMEM88BA6NKF7 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC20.24■□□□□ 0.83
TMEM88BA6NKF7 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM88BA6NKF7 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC20.24■□□□□ 0.83
TMEM88BA6NKF7 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC20.24■□□□□ 0.83
TMEM88BA6NKF7 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM88BA6NKF7 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.24■□□□□ 0.83
TMEM88BA6NKF7 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TMEM88BA6NKF7 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms