Protein–RNA interactions for Protein: A6NJ08

MBD3L5, Putative methyl-CpG-binding domain protein 3-like 5, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L5A6NJ08 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.41■□□□□ 0.06
MBD3L5A6NJ08 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC15.41■□□□□ 0.06
MBD3L5A6NJ08 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MBD3L5A6NJ08 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MBD3L5A6NJ08 PTCHD3P3-201ENST00000403073 906 ntBASIC15.41■□□□□ 0.06
MBD3L5A6NJ08 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
MBD3L5A6NJ08 ATP6V0CP3-201ENST00000417255 467 ntBASIC15.41■□□□□ 0.06
MBD3L5A6NJ08 GPX1P2-201ENST00000429271 606 ntBASIC15.41■□□□□ 0.06
MBD3L5A6NJ08 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.41■□□□□ 0.06
MBD3L5A6NJ08 RIN3-211ENST00000557762 517 ntTSL 3 BASIC15.41■□□□□ 0.06
MBD3L5A6NJ08 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC15.41■□□□□ 0.06
MBD3L5A6NJ08 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
MBD3L5A6NJ08 HOTTIP_1.1-201ENST00000620415 57 ntBASIC15.41■□□□□ 0.06
MBD3L5A6NJ08 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
MBD3L5A6NJ08 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
MBD3L5A6NJ08 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MBD3L5A6NJ08 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC15.41■□□□□ 0.06
MBD3L5A6NJ08 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MBD3L5A6NJ08 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
MBD3L5A6NJ08 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
MBD3L5A6NJ08 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC15.41■□□□□ 0.06
MBD3L5A6NJ08 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MBD3L5A6NJ08 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC15.41■□□□□ 0.06
MBD3L5A6NJ08 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
MBD3L5A6NJ08 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC15.41■□□□□ 0.06
MBD3L5A6NJ08 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
MBD3L5A6NJ08 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
MBD3L5A6NJ08 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.4■□□□□ 0.06
MBD3L5A6NJ08 AC046185.3-201ENST00000623228 1824 ntBASIC15.4■□□□□ 0.06
MBD3L5A6NJ08 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MBD3L5A6NJ08 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MBD3L5A6NJ08 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MBD3L5A6NJ08 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC15.4■□□□□ 0.06
MBD3L5A6NJ08 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
MBD3L5A6NJ08 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MBD3L5A6NJ08 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
MBD3L5A6NJ08 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC15.4■□□□□ 0.06
MBD3L5A6NJ08 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC15.4■□□□□ 0.06
MBD3L5A6NJ08 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC15.4■□□□□ 0.06
MBD3L5A6NJ08 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
MBD3L5A6NJ08 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MBD3L5A6NJ08 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC15.4■□□□□ 0.06
MBD3L5A6NJ08 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC15.4■□□□□ 0.06
MBD3L5A6NJ08 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MBD3L5A6NJ08 MRPL20P1-201ENST00000400819 433 ntBASIC15.4■□□□□ 0.06
MBD3L5A6NJ08 RPSAP43-201ENST00000402237 625 ntBASIC15.4■□□□□ 0.06
MBD3L5A6NJ08 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC15.4■□□□□ 0.06
MBD3L5A6NJ08 HCG4B-203ENST00000450128 991 ntBASIC15.4■□□□□ 0.06
MBD3L5A6NJ08 AL139327.4-201ENST00000612362 153 ntBASIC15.4■□□□□ 0.06
MBD3L5A6NJ08 AC010654.1-201ENST00000615722 808 ntBASIC15.4■□□□□ 0.06
MBD3L5A6NJ08 AC004790.2-201ENST00000623588 572 ntBASIC15.4■□□□□ 0.06
MBD3L5A6NJ08 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MBD3L5A6NJ08 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MBD3L5A6NJ08 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MBD3L5A6NJ08 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MBD3L5A6NJ08 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
MBD3L5A6NJ08 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
MBD3L5A6NJ08 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC15.4■□□□□ 0.06
MBD3L5A6NJ08 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MBD3L5A6NJ08 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MBD3L5A6NJ08 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MBD3L5A6NJ08 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
MBD3L5A6NJ08 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
MBD3L5A6NJ08 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MBD3L5A6NJ08 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MBD3L5A6NJ08 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC15.39■□□□□ 0.05
MBD3L5A6NJ08 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MBD3L5A6NJ08 AC002310.6-201ENST00000624451 1377 ntBASIC15.39■□□□□ 0.05
MBD3L5A6NJ08 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC15.39■□□□□ 0.05
MBD3L5A6NJ08 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MBD3L5A6NJ08 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
MBD3L5A6NJ08 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MBD3L5A6NJ08 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC15.39■□□□□ 0.05
MBD3L5A6NJ08 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
MBD3L5A6NJ08 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MBD3L5A6NJ08 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MBD3L5A6NJ08 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MBD3L5A6NJ08 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MBD3L5A6NJ08 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.39■□□□□ 0.05
MBD3L5A6NJ08 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC15.39■□□□□ 0.05
MBD3L5A6NJ08 SLC25A6P5-201ENST00000435663 894 ntBASIC15.39■□□□□ 0.05
MBD3L5A6NJ08 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC15.39■□□□□ 0.05
MBD3L5A6NJ08 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.39■□□□□ 0.05
MBD3L5A6NJ08 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MBD3L5A6NJ08 KRT18P2-201ENST00000447938 1258 ntBASIC15.39■□□□□ 0.05
MBD3L5A6NJ08 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.39■□□□□ 0.05
MBD3L5A6NJ08 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.39■□□□□ 0.05
MBD3L5A6NJ08 MIR3687-2-201ENST00000577708 61 ntBASIC15.39■□□□□ 0.05
MBD3L5A6NJ08 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC15.39■□□□□ 0.05
MBD3L5A6NJ08 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC15.39■□□□□ 0.05
MBD3L5A6NJ08 AC010327.4-202ENST00000591484 748 ntBASIC15.39■□□□□ 0.05
MBD3L5A6NJ08 MTDHP5-201ENST00000598980 586 ntBASIC15.39■□□□□ 0.05
MBD3L5A6NJ08 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC15.39■□□□□ 0.05
MBD3L5A6NJ08 MIR3687-1-201ENST00000614492 61 ntBASIC15.39■□□□□ 0.05
MBD3L5A6NJ08 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
MBD3L5A6NJ08 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MBD3L5A6NJ08 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MBD3L5A6NJ08 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MBD3L5A6NJ08 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
MBD3L5A6NJ08 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms