Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
HFM1A2PYH4 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.74
HFM1A2PYH4 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC25.89■■□□□ 1.74
HFM1A2PYH4 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.74
HFM1A2PYH4 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
HFM1A2PYH4 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC25.89■■□□□ 1.73
HFM1A2PYH4 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC25.89■■□□□ 1.73
HFM1A2PYH4 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.73
HFM1A2PYH4 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.73
HFM1A2PYH4 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC25.89■■□□□ 1.73
HFM1A2PYH4 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC25.89■■□□□ 1.73
HFM1A2PYH4 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.73
HFM1A2PYH4 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
HFM1A2PYH4 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC25.89■■□□□ 1.73
HFM1A2PYH4 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC25.88■■□□□ 1.73
HFM1A2PYH4 PGAM5P1-201ENST00000518923 814 ntBASIC25.88■■□□□ 1.73
HFM1A2PYH4 KRT18P58-201ENST00000527480 1120 ntBASIC25.88■■□□□ 1.73
HFM1A2PYH4 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC25.88■■□□□ 1.73
HFM1A2PYH4 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC25.88■■□□□ 1.73
HFM1A2PYH4 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC25.88■■□□□ 1.73
HFM1A2PYH4 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC25.88■■□□□ 1.73
HFM1A2PYH4 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
HFM1A2PYH4 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC25.88■■□□□ 1.73
HFM1A2PYH4 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC25.88■■□□□ 1.73
HFM1A2PYH4 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC25.88■■□□□ 1.73
HFM1A2PYH4 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
HFM1A2PYH4 AC120498.9-201ENST00000339021 3867 ntBASIC25.88■■□□□ 1.73
HFM1A2PYH4 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
HFM1A2PYH4 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC25.88■■□□□ 1.73
HFM1A2PYH4 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
HFM1A2PYH4 AC007613.1-201ENST00000572811 2597 ntBASIC25.88■■□□□ 1.73
HFM1A2PYH4 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
HFM1A2PYH4 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC25.88■■□□□ 1.73
HFM1A2PYH4 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
HFM1A2PYH4 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC25.88■■□□□ 1.73
HFM1A2PYH4 AC140113.2-201ENST00000604370 208 ntBASIC25.88■■□□□ 1.73
HFM1A2PYH4 AC005593.1-201ENST00000624894 515 ntBASIC25.88■■□□□ 1.73
HFM1A2PYH4 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC25.88■■□□□ 1.73
HFM1A2PYH4 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
HFM1A2PYH4 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
HFM1A2PYH4 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC25.87■■□□□ 1.73
HFM1A2PYH4 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
HFM1A2PYH4 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC25.87■■□□□ 1.73
HFM1A2PYH4 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
HFM1A2PYH4 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC25.87■■□□□ 1.73
HFM1A2PYH4 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC25.87■■□□□ 1.73
HFM1A2PYH4 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
HFM1A2PYH4 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC25.87■■□□□ 1.73
HFM1A2PYH4 KRT18P13-201ENST00000400056 1290 ntBASIC25.87■■□□□ 1.73
HFM1A2PYH4 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
HFM1A2PYH4 RPP21-221ENST00000428040 594 ntTSL 2 BASIC25.87■■□□□ 1.73
HFM1A2PYH4 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
HFM1A2PYH4 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
HFM1A2PYH4 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC25.87■■□□□ 1.73
HFM1A2PYH4 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC25.86■■□□□ 1.73
HFM1A2PYH4 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
HFM1A2PYH4 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
HFM1A2PYH4 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
HFM1A2PYH4 CRCP-205ENST00000431089 942 ntTSL 2 BASIC25.86■■□□□ 1.73
HFM1A2PYH4 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC25.86■■□□□ 1.73
HFM1A2PYH4 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC25.86■■□□□ 1.73
HFM1A2PYH4 TPR-209ENST00000613151 2478 ntTSL 5 BASIC25.86■■□□□ 1.73
HFM1A2PYH4 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
HFM1A2PYH4 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
HFM1A2PYH4 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
HFM1A2PYH4 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC25.86■■□□□ 1.73
HFM1A2PYH4 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
HFM1A2PYH4 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC25.85■■□□□ 1.73
HFM1A2PYH4 BOC-212ENST00000485230 2173 ntTSL 2 BASIC25.85■■□□□ 1.73
HFM1A2PYH4 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
HFM1A2PYH4 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC25.85■■□□□ 1.73
HFM1A2PYH4 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
HFM1A2PYH4 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
HFM1A2PYH4 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
HFM1A2PYH4 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
HFM1A2PYH4 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC25.85■■□□□ 1.73
HFM1A2PYH4 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
HFM1A2PYH4 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC25.85■■□□□ 1.73
HFM1A2PYH4 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC25.85■■□□□ 1.73
HFM1A2PYH4 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC25.85■■□□□ 1.73
HFM1A2PYH4 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC25.85■■□□□ 1.73
HFM1A2PYH4 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
HFM1A2PYH4 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
HFM1A2PYH4 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
HFM1A2PYH4 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC25.85■■□□□ 1.73
HFM1A2PYH4 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC25.84■■□□□ 1.73
HFM1A2PYH4 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
HFM1A2PYH4 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC25.84■■□□□ 1.73
HFM1A2PYH4 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
HFM1A2PYH4 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
HFM1A2PYH4 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
HFM1A2PYH4 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
HFM1A2PYH4 PTCHD3P3-201ENST00000403073 906 ntBASIC25.84■■□□□ 1.73
HFM1A2PYH4 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC25.84■■□□□ 1.73
HFM1A2PYH4 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
HFM1A2PYH4 FAM197Y3-203ENST00000618346 717 ntBASIC25.84■■□□□ 1.73
HFM1A2PYH4 AC067852.2-201ENST00000590513 2313 ntBASIC25.84■■□□□ 1.73
HFM1A2PYH4 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
HFM1A2PYH4 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
HFM1A2PYH4 ZNF259P1-201ENST00000407656 1365 ntBASIC25.84■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms