Protein–RNA interactions for Protein: A1L190

SYCE3, Synaptonemal complex central element protein 3, humanhuman

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYCE3A1L190 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.08■□□□□ 0.81
SYCE3A1L190 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.08■□□□□ 0.81
SYCE3A1L190 AC116562.2-201ENST00000507042 360 ntBASIC20.08■□□□□ 0.81
SYCE3A1L190 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.08■□□□□ 0.81
SYCE3A1L190 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.08■□□□□ 0.81
SYCE3A1L190 AC006058.3-201ENST00000606217 1069 ntBASIC20.08■□□□□ 0.81
SYCE3A1L190 CD177P1-201ENST00000606252 935 ntBASIC20.08■□□□□ 0.81
SYCE3A1L190 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
SYCE3A1L190 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20.08■□□□□ 0.8
SYCE3A1L190 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC20.08■□□□□ 0.8
SYCE3A1L190 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SYCE3A1L190 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC20.08■□□□□ 0.8
SYCE3A1L190 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SYCE3A1L190 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.8
SYCE3A1L190 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SYCE3A1L190 LINC00554-201ENST00000564841 3011 ntBASIC20.08■□□□□ 0.8
SYCE3A1L190 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC20.07■□□□□ 0.8
SYCE3A1L190 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SYCE3A1L190 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC20.07■□□□□ 0.8
SYCE3A1L190 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SYCE3A1L190 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC20.07■□□□□ 0.8
SYCE3A1L190 FRMD6-AS1-201ENST00000617151 2229 ntBASIC20.07■□□□□ 0.8
SYCE3A1L190 AC026691.1-201ENST00000602502 2017 ntBASIC20.07■□□□□ 0.8
SYCE3A1L190 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC20.07■□□□□ 0.8
SYCE3A1L190 AL662844.4-201ENST00000606367 2838 ntBASIC20.07■□□□□ 0.8
SYCE3A1L190 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SYCE3A1L190 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC20.07■□□□□ 0.8
SYCE3A1L190 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SYCE3A1L190 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC20.07■□□□□ 0.8
SYCE3A1L190 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SYCE3A1L190 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SYCE3A1L190 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.07■□□□□ 0.8
SYCE3A1L190 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC20.07■□□□□ 0.8
SYCE3A1L190 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC20.07■□□□□ 0.8
SYCE3A1L190 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.07■□□□□ 0.8
SYCE3A1L190 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.07■□□□□ 0.8
SYCE3A1L190 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SYCE3A1L190 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.07■□□□□ 0.8
SYCE3A1L190 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
SYCE3A1L190 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.07■□□□□ 0.8
SYCE3A1L190 GCK-209ENST00000616242 2260 ntTSL 5 BASIC20.07■□□□□ 0.8
SYCE3A1L190 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.07■□□□□ 0.8
SYCE3A1L190 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SYCE3A1L190 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.07■□□□□ 0.8
SYCE3A1L190 AC006449.5-201ENST00000610658 2098 ntBASIC20.07■□□□□ 0.8
SYCE3A1L190 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SYCE3A1L190 KRT8P47-201ENST00000604727 1398 ntBASIC20.07■□□□□ 0.8
SYCE3A1L190 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SYCE3A1L190 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SYCE3A1L190 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SYCE3A1L190 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SYCE3A1L190 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SYCE3A1L190 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC20.06■□□□□ 0.8
SYCE3A1L190 AC078925.2-201ENST00000624013 1973 ntBASIC20.06■□□□□ 0.8
SYCE3A1L190 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SYCE3A1L190 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SYCE3A1L190 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SYCE3A1L190 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SYCE3A1L190 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SYCE3A1L190 AC092053.1-201ENST00000605787 1936 ntBASIC20.06■□□□□ 0.8
SYCE3A1L190 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
SYCE3A1L190 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SYCE3A1L190 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
SYCE3A1L190 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SYCE3A1L190 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
SYCE3A1L190 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SYCE3A1L190 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.06■□□□□ 0.8
SYCE3A1L190 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC20.06■□□□□ 0.8
SYCE3A1L190 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.06■□□□□ 0.8
SYCE3A1L190 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.06■□□□□ 0.8
SYCE3A1L190 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SYCE3A1L190 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SYCE3A1L190 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
SYCE3A1L190 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SYCE3A1L190 ADM-205ENST00000528544 586 ntTSL 2 BASIC20.06■□□□□ 0.8
SYCE3A1L190 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.06■□□□□ 0.8
SYCE3A1L190 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC20.06■□□□□ 0.8
SYCE3A1L190 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.06■□□□□ 0.8
SYCE3A1L190 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.06■□□□□ 0.8
SYCE3A1L190 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC20.06■□□□□ 0.8
SYCE3A1L190 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
SYCE3A1L190 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
SYCE3A1L190 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SYCE3A1L190 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
SYCE3A1L190 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC20.05■□□□□ 0.8
SYCE3A1L190 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.05■□□□□ 0.8
SYCE3A1L190 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SYCE3A1L190 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SYCE3A1L190 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SYCE3A1L190 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SYCE3A1L190 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC20.05■□□□□ 0.8
SYCE3A1L190 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SYCE3A1L190 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SYCE3A1L190 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC20.05■□□□□ 0.8
SYCE3A1L190 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC20.05■□□□□ 0.8
SYCE3A1L190 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
SYCE3A1L190 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC20.05■□□□□ 0.8
SYCE3A1L190 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
SYCE3A1L190 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
SYCE3A1L190 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms