Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC13.89□□□□□ -0.19
TRAV30A0A087WSZ9 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV30A0A087WSZ9 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV30A0A087WSZ9 AL391807.1-203ENST00000604392 2365 ntBASIC13.89□□□□□ -0.19
TRAV30A0A087WSZ9 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV30A0A087WSZ9 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV30A0A087WSZ9 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
TRAV30A0A087WSZ9 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV30A0A087WSZ9 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV30A0A087WSZ9 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV30A0A087WSZ9 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
TRAV30A0A087WSZ9 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV30A0A087WSZ9 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV30A0A087WSZ9 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV30A0A087WSZ9 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
TRAV30A0A087WSZ9 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV30A0A087WSZ9 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV30A0A087WSZ9 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
TRAV30A0A087WSZ9 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC13.89□□□□□ -0.19
TRAV30A0A087WSZ9 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV30A0A087WSZ9 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV30A0A087WSZ9 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC13.89□□□□□ -0.19
TRAV30A0A087WSZ9 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV30A0A087WSZ9 ANKRD20A8P-203ENST00000641373 517 ntBASIC13.89□□□□□ -0.19
TRAV30A0A087WSZ9 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV30A0A087WSZ9 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV30A0A087WSZ9 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV30A0A087WSZ9 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV30A0A087WSZ9 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV30A0A087WSZ9 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV30A0A087WSZ9 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TRAV30A0A087WSZ9 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV30A0A087WSZ9 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV30A0A087WSZ9 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
TRAV30A0A087WSZ9 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC13.89□□□□□ -0.19
TRAV30A0A087WSZ9 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV30A0A087WSZ9 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV30A0A087WSZ9 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV30A0A087WSZ9 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
TRAV30A0A087WSZ9 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV30A0A087WSZ9 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV30A0A087WSZ9 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC13.89□□□□□ -0.19
TRAV30A0A087WSZ9 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TRAV30A0A087WSZ9 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV30A0A087WSZ9 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
TRAV30A0A087WSZ9 EML3-212ENST00000494176 2901 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAV30A0A087WSZ9 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAV30A0A087WSZ9 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
TRAV30A0A087WSZ9 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV30A0A087WSZ9 MED29-202ENST00000594368 1471 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAV30A0A087WSZ9 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
TRAV30A0A087WSZ9 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
TRAV30A0A087WSZ9 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
TRAV30A0A087WSZ9 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV30A0A087WSZ9 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC13.88□□□□□ -0.19
TRAV30A0A087WSZ9 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC13.88□□□□□ -0.19
TRAV30A0A087WSZ9 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV30A0A087WSZ9 AC087499.1-201ENST00000418141 1075 ntBASIC13.88□□□□□ -0.19
TRAV30A0A087WSZ9 TSPY12P-201ENST00000421279 868 ntBASIC13.88□□□□□ -0.19
TRAV30A0A087WSZ9 AC093827.2-201ENST00000512654 315 ntBASIC13.88□□□□□ -0.19
TRAV30A0A087WSZ9 PPOX-214ENST00000535223 664 ntTSL 3 BASIC13.88□□□□□ -0.19
TRAV30A0A087WSZ9 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC13.88□□□□□ -0.19
TRAV30A0A087WSZ9 DUT-205ENST00000558813 769 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAV30A0A087WSZ9 TEN1-204ENST00000588202 862 ntTSL 3 BASIC13.88□□□□□ -0.19
TRAV30A0A087WSZ9 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC13.88□□□□□ -0.19
TRAV30A0A087WSZ9 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV30A0A087WSZ9 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC13.88□□□□□ -0.19
TRAV30A0A087WSZ9 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC13.88□□□□□ -0.19
TRAV30A0A087WSZ9 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV30A0A087WSZ9 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV30A0A087WSZ9 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV30A0A087WSZ9 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV30A0A087WSZ9 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV30A0A087WSZ9 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV30A0A087WSZ9 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV30A0A087WSZ9 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV30A0A087WSZ9 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV30A0A087WSZ9 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV30A0A087WSZ9 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV30A0A087WSZ9 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
TRAV30A0A087WSZ9 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC13.88□□□□□ -0.19
TRAV30A0A087WSZ9 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAV30A0A087WSZ9 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV30A0A087WSZ9 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV30A0A087WSZ9 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV30A0A087WSZ9 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV30A0A087WSZ9 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV30A0A087WSZ9 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC13.87□□□□□ -0.19
TRAV30A0A087WSZ9 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV30A0A087WSZ9 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAV30A0A087WSZ9 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV30A0A087WSZ9 AC103702.1-201ENST00000548801 2630 ntBASIC13.87□□□□□ -0.19
TRAV30A0A087WSZ9 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV30A0A087WSZ9 LINC00304-203ENST00000565008 1864 ntBASIC13.87□□□□□ -0.19
TRAV30A0A087WSZ9 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV30A0A087WSZ9 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV30A0A087WSZ9 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV30A0A087WSZ9 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC13.87□□□□□ -0.19
TRAV30A0A087WSZ9 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
TRAV30A0A087WSZ9 BX276092.7-203ENST00000637198 1536 ntBASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms