Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 DOC2GP-204ENST00000639052 2548 ntBASIC15.19■□□□□ 0.02
TRAV18A0A075B6X5 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV18A0A075B6X5 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
TRAV18A0A075B6X5 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAV18A0A075B6X5 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV18A0A075B6X5 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAV18A0A075B6X5 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV18A0A075B6X5 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV18A0A075B6X5 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
TRAV18A0A075B6X5 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC15.19■□□□□ 0.02
TRAV18A0A075B6X5 FLJ38576-201ENST00000623820 2459 ntBASIC15.19■□□□□ 0.02
TRAV18A0A075B6X5 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV18A0A075B6X5 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV18A0A075B6X5 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
TRAV18A0A075B6X5 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV18A0A075B6X5 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TRAV18A0A075B6X5 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV18A0A075B6X5 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV18A0A075B6X5 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV18A0A075B6X5 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
TRAV18A0A075B6X5 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TRAV18A0A075B6X5 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
TRAV18A0A075B6X5 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC15.18■□□□□ 0.02
TRAV18A0A075B6X5 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
TRAV18A0A075B6X5 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV18A0A075B6X5 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC15.18■□□□□ 0.02
TRAV18A0A075B6X5 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC15.18■□□□□ 0.02
TRAV18A0A075B6X5 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV18A0A075B6X5 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV18A0A075B6X5 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV18A0A075B6X5 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
TRAV18A0A075B6X5 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC15.18■□□□□ 0.02
TRAV18A0A075B6X5 CD177P1-201ENST00000606252 935 ntBASIC15.18■□□□□ 0.02
TRAV18A0A075B6X5 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC15.18■□□□□ 0.02
TRAV18A0A075B6X5 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TRAV18A0A075B6X5 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV18A0A075B6X5 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV18A0A075B6X5 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
TRAV18A0A075B6X5 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV18A0A075B6X5 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
TRAV18A0A075B6X5 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV18A0A075B6X5 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV18A0A075B6X5 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
TRAV18A0A075B6X5 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
TRAV18A0A075B6X5 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV18A0A075B6X5 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC15.18■□□□□ 0.02
TRAV18A0A075B6X5 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV18A0A075B6X5 SRI-203ENST00000419179 1307 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV18A0A075B6X5 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV18A0A075B6X5 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAV18A0A075B6X5 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV18A0A075B6X5 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV18A0A075B6X5 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV18A0A075B6X5 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV18A0A075B6X5 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV18A0A075B6X5 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAV18A0A075B6X5 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
TRAV18A0A075B6X5 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV18A0A075B6X5 LINC01502-201ENST00000445997 2471 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV18A0A075B6X5 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
TRAV18A0A075B6X5 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV18A0A075B6X5 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV18A0A075B6X5 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC15.17■□□□□ 0.02
TRAV18A0A075B6X5 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV18A0A075B6X5 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV18A0A075B6X5 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC15.17■□□□□ 0.02
TRAV18A0A075B6X5 AC116562.2-201ENST00000507042 360 ntBASIC15.17■□□□□ 0.02
TRAV18A0A075B6X5 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC15.17■□□□□ 0.02
TRAV18A0A075B6X5 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC15.17■□□□□ 0.02
TRAV18A0A075B6X5 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAV18A0A075B6X5 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV18A0A075B6X5 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TRAV18A0A075B6X5 AC010240.3-201ENST00000607688 395 ntBASIC15.17■□□□□ 0.02
TRAV18A0A075B6X5 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAV18A0A075B6X5 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV18A0A075B6X5 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV18A0A075B6X5 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV18A0A075B6X5 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TRAV18A0A075B6X5 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
TRAV18A0A075B6X5 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV18A0A075B6X5 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAV18A0A075B6X5 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV18A0A075B6X5 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAV18A0A075B6X5 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV18A0A075B6X5 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
TRAV18A0A075B6X5 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
TRAV18A0A075B6X5 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV18A0A075B6X5 AC016396.2-201ENST00000562575 1417 ntBASIC15.17■□□□□ 0.02
TRAV18A0A075B6X5 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
TRAV18A0A075B6X5 AC008741.2-201ENST00000612792 3115 ntBASIC15.17■□□□□ 0.02
TRAV18A0A075B6X5 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV18A0A075B6X5 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV18A0A075B6X5 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.16■□□□□ 0.02
TRAV18A0A075B6X5 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV18A0A075B6X5 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
TRAV18A0A075B6X5 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TRAV18A0A075B6X5 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TRAV18A0A075B6X5 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC15.16■□□□□ 0.02
TRAV18A0A075B6X5 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV18A0A075B6X5 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms