Protein–RNA interactions for Protein: Q9Y6Q1

CAPN6, Calpain-6, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN6Q9Y6Q1 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.68■□□□□ 0.58
CAPN6Q9Y6Q1 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN6Q9Y6Q1 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN6Q9Y6Q1 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
CAPN6Q9Y6Q1 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
CAPN6Q9Y6Q1 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN6Q9Y6Q1 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN6Q9Y6Q1 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN6Q9Y6Q1 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN6Q9Y6Q1 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN6Q9Y6Q1 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN6Q9Y6Q1 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN6Q9Y6Q1 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN6Q9Y6Q1 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CAPN6Q9Y6Q1 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.68■□□□□ 0.58
CAPN6Q9Y6Q1 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CAPN6Q9Y6Q1 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CAPN6Q9Y6Q1 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC18.67■□□□□ 0.58
CAPN6Q9Y6Q1 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CAPN6Q9Y6Q1 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
CAPN6Q9Y6Q1 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CAPN6Q9Y6Q1 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.67■□□□□ 0.58
CAPN6Q9Y6Q1 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CAPN6Q9Y6Q1 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.67■□□□□ 0.58
CAPN6Q9Y6Q1 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CAPN6Q9Y6Q1 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CAPN6Q9Y6Q1 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CAPN6Q9Y6Q1 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CAPN6Q9Y6Q1 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CAPN6Q9Y6Q1 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
CAPN6Q9Y6Q1 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.67■□□□□ 0.58
CAPN6Q9Y6Q1 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC18.67■□□□□ 0.58
CAPN6Q9Y6Q1 AC112698.1-201ENST00000510299 916 ntBASIC18.67■□□□□ 0.58
CAPN6Q9Y6Q1 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.67■□□□□ 0.58
CAPN6Q9Y6Q1 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CAPN6Q9Y6Q1 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.67■□□□□ 0.58
CAPN6Q9Y6Q1 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.67■□□□□ 0.58
CAPN6Q9Y6Q1 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.67■□□□□ 0.58
CAPN6Q9Y6Q1 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
CAPN6Q9Y6Q1 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.67■□□□□ 0.58
CAPN6Q9Y6Q1 CES3-203ENST00000543856 3178 ntTSL 2 BASIC18.67■□□□□ 0.58
CAPN6Q9Y6Q1 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CAPN6Q9Y6Q1 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CAPN6Q9Y6Q1 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CAPN6Q9Y6Q1 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC18.67■□□□□ 0.58
CAPN6Q9Y6Q1 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CAPN6Q9Y6Q1 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CAPN6Q9Y6Q1 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CAPN6Q9Y6Q1 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CAPN6Q9Y6Q1 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CAPN6Q9Y6Q1 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CAPN6Q9Y6Q1 SRGAP2B-207ENST00000641863 2367 ntAPPRIS P5 BASIC18.67■□□□□ 0.58
CAPN6Q9Y6Q1 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
CAPN6Q9Y6Q1 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CAPN6Q9Y6Q1 AC092053.1-201ENST00000605787 1936 ntBASIC18.66■□□□□ 0.58
CAPN6Q9Y6Q1 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CAPN6Q9Y6Q1 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CAPN6Q9Y6Q1 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CAPN6Q9Y6Q1 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CAPN6Q9Y6Q1 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CAPN6Q9Y6Q1 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.66■□□□□ 0.58
CAPN6Q9Y6Q1 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CAPN6Q9Y6Q1 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CAPN6Q9Y6Q1 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CAPN6Q9Y6Q1 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.66■□□□□ 0.58
CAPN6Q9Y6Q1 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CAPN6Q9Y6Q1 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.66■□□□□ 0.58
CAPN6Q9Y6Q1 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.66■□□□□ 0.58
CAPN6Q9Y6Q1 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.66■□□□□ 0.58
CAPN6Q9Y6Q1 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CAPN6Q9Y6Q1 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.66■□□□□ 0.58
CAPN6Q9Y6Q1 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.66■□□□□ 0.58
CAPN6Q9Y6Q1 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.66■□□□□ 0.58
CAPN6Q9Y6Q1 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.66■□□□□ 0.58
CAPN6Q9Y6Q1 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.66■□□□□ 0.58
CAPN6Q9Y6Q1 AC009154.2-201ENST00000621177 724 ntBASIC18.66■□□□□ 0.58
CAPN6Q9Y6Q1 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.66■□□□□ 0.58
CAPN6Q9Y6Q1 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CAPN6Q9Y6Q1 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CAPN6Q9Y6Q1 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
CAPN6Q9Y6Q1 KRT17P2-201ENST00000300992 1314 ntBASIC18.66■□□□□ 0.58
CAPN6Q9Y6Q1 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CAPN6Q9Y6Q1 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CAPN6Q9Y6Q1 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.66■□□□□ 0.58
CAPN6Q9Y6Q1 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CAPN6Q9Y6Q1 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CAPN6Q9Y6Q1 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CAPN6Q9Y6Q1 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
CAPN6Q9Y6Q1 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN6Q9Y6Q1 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN6Q9Y6Q1 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN6Q9Y6Q1 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.65■□□□□ 0.58
CAPN6Q9Y6Q1 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC18.65■□□□□ 0.58
CAPN6Q9Y6Q1 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CAPN6Q9Y6Q1 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CAPN6Q9Y6Q1 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC18.65■□□□□ 0.58
CAPN6Q9Y6Q1 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
CAPN6Q9Y6Q1 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.65■□□□□ 0.58
CAPN6Q9Y6Q1 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CAPN6Q9Y6Q1 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms