Protein–RNA interactions for Protein: Q9Y6N3

CLCA3P, Calcium-activated chloride channel regulator family member 3, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCA3PQ9Y6N3 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLCA3PQ9Y6N3 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLCA3PQ9Y6N3 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
CLCA3PQ9Y6N3 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CLCA3PQ9Y6N3 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
CLCA3PQ9Y6N3 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.7■□□□□ 0.26
CLCA3PQ9Y6N3 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC16.7■□□□□ 0.26
CLCA3PQ9Y6N3 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLCA3PQ9Y6N3 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.7■□□□□ 0.26
CLCA3PQ9Y6N3 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC16.7■□□□□ 0.26
CLCA3PQ9Y6N3 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.7■□□□□ 0.26
CLCA3PQ9Y6N3 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.7■□□□□ 0.26
CLCA3PQ9Y6N3 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
CLCA3PQ9Y6N3 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLCA3PQ9Y6N3 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLCA3PQ9Y6N3 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.7■□□□□ 0.26
CLCA3PQ9Y6N3 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLCA3PQ9Y6N3 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLCA3PQ9Y6N3 NSUN5P1-202ENST00000421140 1535 ntBASIC16.7■□□□□ 0.26
CLCA3PQ9Y6N3 NSUN5P2-203ENST00000457352 1529 ntBASIC16.7■□□□□ 0.26
CLCA3PQ9Y6N3 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLCA3PQ9Y6N3 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLCA3PQ9Y6N3 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC16.7■□□□□ 0.26
CLCA3PQ9Y6N3 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC16.7■□□□□ 0.26
CLCA3PQ9Y6N3 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLCA3PQ9Y6N3 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.69■□□□□ 0.26
CLCA3PQ9Y6N3 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLCA3PQ9Y6N3 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.69■□□□□ 0.26
CLCA3PQ9Y6N3 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.69■□□□□ 0.26
CLCA3PQ9Y6N3 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLCA3PQ9Y6N3 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CLCA3PQ9Y6N3 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLCA3PQ9Y6N3 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLCA3PQ9Y6N3 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLCA3PQ9Y6N3 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.69■□□□□ 0.26
CLCA3PQ9Y6N3 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CLCA3PQ9Y6N3 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLCA3PQ9Y6N3 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLCA3PQ9Y6N3 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.69■□□□□ 0.26
CLCA3PQ9Y6N3 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLCA3PQ9Y6N3 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLCA3PQ9Y6N3 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLCA3PQ9Y6N3 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLCA3PQ9Y6N3 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.69■□□□□ 0.26
CLCA3PQ9Y6N3 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
CLCA3PQ9Y6N3 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.69■□□□□ 0.26
CLCA3PQ9Y6N3 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.69■□□□□ 0.26
CLCA3PQ9Y6N3 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLCA3PQ9Y6N3 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CLCA3PQ9Y6N3 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.69■□□□□ 0.26
CLCA3PQ9Y6N3 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.69■□□□□ 0.26
CLCA3PQ9Y6N3 AC091607.1-201ENST00000490318 1060 ntBASIC16.69■□□□□ 0.26
CLCA3PQ9Y6N3 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.69■□□□□ 0.26
CLCA3PQ9Y6N3 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLCA3PQ9Y6N3 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.69■□□□□ 0.26
CLCA3PQ9Y6N3 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.69■□□□□ 0.26
CLCA3PQ9Y6N3 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.69■□□□□ 0.26
CLCA3PQ9Y6N3 AP005901.3-202ENST00000581653 237 ntBASIC16.69■□□□□ 0.26
CLCA3PQ9Y6N3 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC16.69■□□□□ 0.26
CLCA3PQ9Y6N3 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.69■□□□□ 0.26
CLCA3PQ9Y6N3 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLCA3PQ9Y6N3 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.69■□□□□ 0.26
CLCA3PQ9Y6N3 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLCA3PQ9Y6N3 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.69■□□□□ 0.26
CLCA3PQ9Y6N3 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CLCA3PQ9Y6N3 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLCA3PQ9Y6N3 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.69■□□□□ 0.26
CLCA3PQ9Y6N3 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
CLCA3PQ9Y6N3 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.69■□□□□ 0.26
CLCA3PQ9Y6N3 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
CLCA3PQ9Y6N3 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
CLCA3PQ9Y6N3 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
CLCA3PQ9Y6N3 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLCA3PQ9Y6N3 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLCA3PQ9Y6N3 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLCA3PQ9Y6N3 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.68■□□□□ 0.26
CLCA3PQ9Y6N3 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLCA3PQ9Y6N3 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLCA3PQ9Y6N3 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLCA3PQ9Y6N3 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.68■□□□□ 0.26
CLCA3PQ9Y6N3 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLCA3PQ9Y6N3 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLCA3PQ9Y6N3 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLCA3PQ9Y6N3 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.68■□□□□ 0.26
CLCA3PQ9Y6N3 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
CLCA3PQ9Y6N3 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLCA3PQ9Y6N3 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.68■□□□□ 0.26
CLCA3PQ9Y6N3 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLCA3PQ9Y6N3 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLCA3PQ9Y6N3 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLCA3PQ9Y6N3 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
CLCA3PQ9Y6N3 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.68■□□□□ 0.26
CLCA3PQ9Y6N3 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLCA3PQ9Y6N3 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
CLCA3PQ9Y6N3 IGHV3-47-201ENST00000425060 335 ntBASIC16.68■□□□□ 0.26
CLCA3PQ9Y6N3 NUS1P1-201ENST00000446295 882 ntBASIC16.68■□□□□ 0.26
CLCA3PQ9Y6N3 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.68■□□□□ 0.26
CLCA3PQ9Y6N3 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.68■□□□□ 0.26
CLCA3PQ9Y6N3 CLEC4GP1-201ENST00000596555 870 ntBASIC16.68■□□□□ 0.26
CLCA3PQ9Y6N3 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms