Protein–RNA interactions for Protein: Q9Y5N1

HRH3, Histamine H3 receptor, humanhuman

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HRH3Q9Y5N1 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HRH3Q9Y5N1 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HRH3Q9Y5N1 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HRH3Q9Y5N1 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HRH3Q9Y5N1 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HRH3Q9Y5N1 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HRH3Q9Y5N1 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HRH3Q9Y5N1 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC16.32■□□□□ 0.2
HRH3Q9Y5N1 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC16.32■□□□□ 0.2
HRH3Q9Y5N1 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HRH3Q9Y5N1 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.32■□□□□ 0.2
HRH3Q9Y5N1 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.32■□□□□ 0.2
HRH3Q9Y5N1 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.32■□□□□ 0.2
HRH3Q9Y5N1 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.32■□□□□ 0.2
HRH3Q9Y5N1 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.32■□□□□ 0.2
HRH3Q9Y5N1 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
HRH3Q9Y5N1 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.32■□□□□ 0.2
HRH3Q9Y5N1 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.32■□□□□ 0.2
HRH3Q9Y5N1 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HRH3Q9Y5N1 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.32■□□□□ 0.2
HRH3Q9Y5N1 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HRH3Q9Y5N1 AC011840.4-201ENST00000578471 627 ntBASIC16.32■□□□□ 0.2
HRH3Q9Y5N1 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
HRH3Q9Y5N1 IGHV3OR16-7-201ENST00000604106 360 ntBASIC16.32■□□□□ 0.2
HRH3Q9Y5N1 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
HRH3Q9Y5N1 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.32■□□□□ 0.2
HRH3Q9Y5N1 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
HRH3Q9Y5N1 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HRH3Q9Y5N1 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
HRH3Q9Y5N1 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
HRH3Q9Y5N1 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HRH3Q9Y5N1 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HRH3Q9Y5N1 CD276-203ENST00000537340 2439 ntTSL 2 BASIC16.31■□□□□ 0.2
HRH3Q9Y5N1 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HRH3Q9Y5N1 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HRH3Q9Y5N1 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
HRH3Q9Y5N1 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
HRH3Q9Y5N1 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HRH3Q9Y5N1 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
HRH3Q9Y5N1 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HRH3Q9Y5N1 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HRH3Q9Y5N1 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HRH3Q9Y5N1 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.31■□□□□ 0.2
HRH3Q9Y5N1 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC16.31■□□□□ 0.2
HRH3Q9Y5N1 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
HRH3Q9Y5N1 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HRH3Q9Y5N1 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.31■□□□□ 0.2
HRH3Q9Y5N1 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HRH3Q9Y5N1 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.31■□□□□ 0.2
HRH3Q9Y5N1 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
HRH3Q9Y5N1 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
HRH3Q9Y5N1 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.31■□□□□ 0.2
HRH3Q9Y5N1 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
HRH3Q9Y5N1 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HRH3Q9Y5N1 NUS1P2-201ENST00000417358 873 ntBASIC16.31■□□□□ 0.2
HRH3Q9Y5N1 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.31■□□□□ 0.2
HRH3Q9Y5N1 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HRH3Q9Y5N1 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.31■□□□□ 0.2
HRH3Q9Y5N1 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC16.31■□□□□ 0.2
HRH3Q9Y5N1 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.31■□□□□ 0.2
HRH3Q9Y5N1 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.31■□□□□ 0.2
HRH3Q9Y5N1 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HRH3Q9Y5N1 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
HRH3Q9Y5N1 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.31■□□□□ 0.2
HRH3Q9Y5N1 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HRH3Q9Y5N1 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.31■□□□□ 0.2
HRH3Q9Y5N1 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.31■□□□□ 0.2
HRH3Q9Y5N1 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
HRH3Q9Y5N1 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HRH3Q9Y5N1 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.31■□□□□ 0.2
HRH3Q9Y5N1 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HRH3Q9Y5N1 AL356309.3-201ENST00000624132 1934 ntBASIC16.31■□□□□ 0.2
HRH3Q9Y5N1 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.31■□□□□ 0.2
HRH3Q9Y5N1 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HRH3Q9Y5N1 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HRH3Q9Y5N1 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HRH3Q9Y5N1 AC138028.4-201ENST00000564984 1845 ntBASIC16.31■□□□□ 0.2
HRH3Q9Y5N1 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
HRH3Q9Y5N1 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HRH3Q9Y5N1 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HRH3Q9Y5N1 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HRH3Q9Y5N1 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC16.3■□□□□ 0.2
HRH3Q9Y5N1 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
HRH3Q9Y5N1 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
HRH3Q9Y5N1 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HRH3Q9Y5N1 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
HRH3Q9Y5N1 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HRH3Q9Y5N1 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
HRH3Q9Y5N1 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC16.3■□□□□ 0.2
HRH3Q9Y5N1 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.3■□□□□ 0.2
HRH3Q9Y5N1 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
HRH3Q9Y5N1 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HRH3Q9Y5N1 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HRH3Q9Y5N1 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HRH3Q9Y5N1 HLA-A-201ENST00000376802 1334 ntBASIC16.3■□□□□ 0.2
HRH3Q9Y5N1 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HRH3Q9Y5N1 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HRH3Q9Y5N1 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HRH3Q9Y5N1 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HRH3Q9Y5N1 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms