Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB3Q9Y5G1 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PCDHGB3Q9Y5G1 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PCDHGB3Q9Y5G1 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDHGB3Q9Y5G1 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGB3Q9Y5G1 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGB3Q9Y5G1 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.77■□□□□ 0.28
PCDHGB3Q9Y5G1 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGB3Q9Y5G1 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGB3Q9Y5G1 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGB3Q9Y5G1 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
PCDHGB3Q9Y5G1 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGB3Q9Y5G1 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.77■□□□□ 0.28
PCDHGB3Q9Y5G1 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGB3Q9Y5G1 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.77■□□□□ 0.28
PCDHGB3Q9Y5G1 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGB3Q9Y5G1 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.77■□□□□ 0.28
PCDHGB3Q9Y5G1 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGB3Q9Y5G1 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.77■□□□□ 0.28
PCDHGB3Q9Y5G1 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGB3Q9Y5G1 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
PCDHGB3Q9Y5G1 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHGB3Q9Y5G1 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHGB3Q9Y5G1 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHGB3Q9Y5G1 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHGB3Q9Y5G1 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHGB3Q9Y5G1 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHGB3Q9Y5G1 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHGB3Q9Y5G1 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.77■□□□□ 0.27
PCDHGB3Q9Y5G1 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.77■□□□□ 0.27
PCDHGB3Q9Y5G1 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHGB3Q9Y5G1 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
PCDHGB3Q9Y5G1 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB3Q9Y5G1 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB3Q9Y5G1 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB3Q9Y5G1 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB3Q9Y5G1 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PCDHGB3Q9Y5G1 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB3Q9Y5G1 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB3Q9Y5G1 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB3Q9Y5G1 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHGB3Q9Y5G1 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB3Q9Y5G1 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
PCDHGB3Q9Y5G1 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHGB3Q9Y5G1 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB3Q9Y5G1 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB3Q9Y5G1 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB3Q9Y5G1 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB3Q9Y5G1 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHGB3Q9Y5G1 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB3Q9Y5G1 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB3Q9Y5G1 HES2-202ENST00000377836 507 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHGB3Q9Y5G1 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB3Q9Y5G1 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
PCDHGB3Q9Y5G1 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB3Q9Y5G1 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.76■□□□□ 0.27
PCDHGB3Q9Y5G1 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.76■□□□□ 0.27
PCDHGB3Q9Y5G1 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHGB3Q9Y5G1 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
PCDHGB3Q9Y5G1 AC069148.1-201ENST00000608741 768 ntBASIC16.76■□□□□ 0.27
PCDHGB3Q9Y5G1 OR6D1P-203ENST00000641209 4860 ntBASIC16.76■□□□□ 0.27
PCDHGB3Q9Y5G1 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB3Q9Y5G1 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC16.76■□□□□ 0.27
PCDHGB3Q9Y5G1 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC16.76■□□□□ 0.27
PCDHGB3Q9Y5G1 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB3Q9Y5G1 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC16.76■□□□□ 0.27
PCDHGB3Q9Y5G1 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB3Q9Y5G1 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB3Q9Y5G1 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB3Q9Y5G1 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB3Q9Y5G1 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
PCDHGB3Q9Y5G1 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC16.76■□□□□ 0.27
PCDHGB3Q9Y5G1 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
PCDHGB3Q9Y5G1 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
PCDHGB3Q9Y5G1 AC132938.6-201ENST00000623828 1655 ntBASIC16.75■□□□□ 0.27
PCDHGB3Q9Y5G1 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGB3Q9Y5G1 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGB3Q9Y5G1 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
PCDHGB3Q9Y5G1 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGB3Q9Y5G1 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGB3Q9Y5G1 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGB3Q9Y5G1 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGB3Q9Y5G1 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
PCDHGB3Q9Y5G1 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGB3Q9Y5G1 LINC00602-201ENST00000629776 2065 ntBASIC16.75■□□□□ 0.27
PCDHGB3Q9Y5G1 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGB3Q9Y5G1 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGB3Q9Y5G1 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
PCDHGB3Q9Y5G1 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGB3Q9Y5G1 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGB3Q9Y5G1 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGB3Q9Y5G1 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGB3Q9Y5G1 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
PCDHGB3Q9Y5G1 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.75■□□□□ 0.27
PCDHGB3Q9Y5G1 HLA-F-220ENST00000434407 884 ntBASIC16.75■□□□□ 0.27
PCDHGB3Q9Y5G1 KRT18P65-201ENST00000439811 1286 ntBASIC16.75■□□□□ 0.27
PCDHGB3Q9Y5G1 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.75■□□□□ 0.27
PCDHGB3Q9Y5G1 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC16.75■□□□□ 0.27
PCDHGB3Q9Y5G1 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC16.75■□□□□ 0.27
PCDHGB3Q9Y5G1 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms