Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC14.79□□□□□ -0.04
KCNIP3Q9Y2W7 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
KCNIP3Q9Y2W7 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC14.79□□□□□ -0.04
KCNIP3Q9Y2W7 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KCNIP3Q9Y2W7 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC14.79□□□□□ -0.04
KCNIP3Q9Y2W7 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
KCNIP3Q9Y2W7 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
KCNIP3Q9Y2W7 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
KCNIP3Q9Y2W7 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
KCNIP3Q9Y2W7 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC14.79□□□□□ -0.04
KCNIP3Q9Y2W7 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC14.79□□□□□ -0.04
KCNIP3Q9Y2W7 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
KCNIP3Q9Y2W7 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC14.79□□□□□ -0.04
KCNIP3Q9Y2W7 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.79□□□□□ -0.04
KCNIP3Q9Y2W7 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC14.79□□□□□ -0.04
KCNIP3Q9Y2W7 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
KCNIP3Q9Y2W7 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
KCNIP3Q9Y2W7 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC14.79□□□□□ -0.04
KCNIP3Q9Y2W7 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC14.79□□□□□ -0.04
KCNIP3Q9Y2W7 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC14.79□□□□□ -0.04
KCNIP3Q9Y2W7 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC14.79□□□□□ -0.04
KCNIP3Q9Y2W7 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC14.79□□□□□ -0.04
KCNIP3Q9Y2W7 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC14.79□□□□□ -0.04
KCNIP3Q9Y2W7 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KCNIP3Q9Y2W7 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
KCNIP3Q9Y2W7 AC142086.2-201ENST00000569753 217 ntBASIC14.79□□□□□ -0.04
KCNIP3Q9Y2W7 MIR3180-4-201ENST00000582223 153 ntBASIC14.79□□□□□ -0.04
KCNIP3Q9Y2W7 AC008687.5-201ENST00000593746 558 ntBASIC14.79□□□□□ -0.04
KCNIP3Q9Y2W7 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC14.79□□□□□ -0.04
KCNIP3Q9Y2W7 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
KCNIP3Q9Y2W7 AL024508.2-201ENST00000607749 1894 ntBASIC14.79□□□□□ -0.04
KCNIP3Q9Y2W7 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.79□□□□□ -0.04
KCNIP3Q9Y2W7 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC14.79□□□□□ -0.04
KCNIP3Q9Y2W7 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
KCNIP3Q9Y2W7 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC14.79□□□□□ -0.04
KCNIP3Q9Y2W7 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC14.79□□□□□ -0.04
KCNIP3Q9Y2W7 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC14.79□□□□□ -0.04
KCNIP3Q9Y2W7 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
KCNIP3Q9Y2W7 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
KCNIP3Q9Y2W7 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
KCNIP3Q9Y2W7 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
KCNIP3Q9Y2W7 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
KCNIP3Q9Y2W7 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KCNIP3Q9Y2W7 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KCNIP3Q9Y2W7 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
KCNIP3Q9Y2W7 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.78□□□□□ -0.04
KCNIP3Q9Y2W7 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC14.78□□□□□ -0.04
KCNIP3Q9Y2W7 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
KCNIP3Q9Y2W7 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
KCNIP3Q9Y2W7 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
KCNIP3Q9Y2W7 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KCNIP3Q9Y2W7 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
KCNIP3Q9Y2W7 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC14.78□□□□□ -0.04
KCNIP3Q9Y2W7 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
KCNIP3Q9Y2W7 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KCNIP3Q9Y2W7 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
KCNIP3Q9Y2W7 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
KCNIP3Q9Y2W7 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KCNIP3Q9Y2W7 AC096733.2-201ENST00000609937 1394 ntBASIC14.78□□□□□ -0.04
KCNIP3Q9Y2W7 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KCNIP3Q9Y2W7 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
KCNIP3Q9Y2W7 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KCNIP3Q9Y2W7 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
KCNIP3Q9Y2W7 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
KCNIP3Q9Y2W7 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KCNIP3Q9Y2W7 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KCNIP3Q9Y2W7 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC14.78□□□□□ -0.04
KCNIP3Q9Y2W7 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
KCNIP3Q9Y2W7 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC14.78□□□□□ -0.04
KCNIP3Q9Y2W7 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC14.78□□□□□ -0.04
KCNIP3Q9Y2W7 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC14.78□□□□□ -0.04
KCNIP3Q9Y2W7 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KCNIP3Q9Y2W7 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC14.78□□□□□ -0.04
KCNIP3Q9Y2W7 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KCNIP3Q9Y2W7 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
KCNIP3Q9Y2W7 AC100803.2-201ENST00000562459 1963 ntBASIC14.78□□□□□ -0.04
KCNIP3Q9Y2W7 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
KCNIP3Q9Y2W7 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC14.78□□□□□ -0.04
KCNIP3Q9Y2W7 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
KCNIP3Q9Y2W7 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
KCNIP3Q9Y2W7 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
KCNIP3Q9Y2W7 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
KCNIP3Q9Y2W7 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
KCNIP3Q9Y2W7 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
KCNIP3Q9Y2W7 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
KCNIP3Q9Y2W7 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
KCNIP3Q9Y2W7 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC14.77□□□□□ -0.04
KCNIP3Q9Y2W7 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
KCNIP3Q9Y2W7 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
KCNIP3Q9Y2W7 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.77□□□□□ -0.04
KCNIP3Q9Y2W7 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
KCNIP3Q9Y2W7 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
KCNIP3Q9Y2W7 NBEA-203ENST00000379939 10738 ntAPPRIS ALT1 TSL 5 BASIC14.77□□□□□ -0.04
KCNIP3Q9Y2W7 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC14.77□□□□□ -0.04
KCNIP3Q9Y2W7 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
KCNIP3Q9Y2W7 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
KCNIP3Q9Y2W7 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
KCNIP3Q9Y2W7 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC14.77□□□□□ -0.05
KCNIP3Q9Y2W7 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC14.77□□□□□ -0.05
KCNIP3Q9Y2W7 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms