Protein–RNA interactions for Protein: Q9Y2U8

LEMD3, Inner nuclear membrane protein Man1, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3Q9Y2U8 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
LEMD3Q9Y2U8 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC21.3■■□□□ 1
LEMD3Q9Y2U8 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC21.3■■□□□ 1
LEMD3Q9Y2U8 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LEMD3Q9Y2U8 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
LEMD3Q9Y2U8 AL590787.1-201ENST00000568856 1315 ntBASIC21.29■■□□□ 1
LEMD3Q9Y2U8 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC21.29■■□□□ 1
LEMD3Q9Y2U8 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC21.29■■□□□ 1
LEMD3Q9Y2U8 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC21.29■■□□□ 1
LEMD3Q9Y2U8 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC21.29■■□□□ 1
LEMD3Q9Y2U8 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
LEMD3Q9Y2U8 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LEMD3Q9Y2U8 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LEMD3Q9Y2U8 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
LEMD3Q9Y2U8 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LEMD3Q9Y2U8 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC21.29■■□□□ 1
LEMD3Q9Y2U8 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC21.29■■□□□ 1
LEMD3Q9Y2U8 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
LEMD3Q9Y2U8 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LEMD3Q9Y2U8 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LEMD3Q9Y2U8 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC21.29■■□□□ 1
LEMD3Q9Y2U8 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
LEMD3Q9Y2U8 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LEMD3Q9Y2U8 ENSA-206ENST00000361631 725 ntTSL 2 BASIC21.29■■□□□ 1
LEMD3Q9Y2U8 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC21.29■■□□□ 1
LEMD3Q9Y2U8 HTR5BP-201ENST00000430851 1154 ntBASIC21.29■■□□□ 1
LEMD3Q9Y2U8 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC21.29■■□□□ 1
LEMD3Q9Y2U8 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC21.29■■□□□ 1
LEMD3Q9Y2U8 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC21.29■■□□□ 1
LEMD3Q9Y2U8 AQP6-205ENST00000618286 829 ntTSL 5 BASIC21.29■■□□□ 1
LEMD3Q9Y2U8 AC004877.2-201ENST00000623941 599 ntBASIC21.29■■□□□ 1
LEMD3Q9Y2U8 AC010507.1-201ENST00000633895 436 ntBASIC21.29■■□□□ 1
LEMD3Q9Y2U8 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC21.29■■□□□ 1
LEMD3Q9Y2U8 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC21.29■■□□□ 1
LEMD3Q9Y2U8 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC21.29■■□□□ 1
LEMD3Q9Y2U8 AC087289.5-201ENST00000586076 3175 ntBASIC21.29■■□□□ 1
LEMD3Q9Y2U8 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LEMD3Q9Y2U8 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LEMD3Q9Y2U8 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC21.28■■□□□ 1
LEMD3Q9Y2U8 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC21.28■■□□□ 1
LEMD3Q9Y2U8 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC21.28■■□□□ 1
LEMD3Q9Y2U8 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LEMD3Q9Y2U8 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC21.28■■□□□ 1
LEMD3Q9Y2U8 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC21.28■■□□□ 1
LEMD3Q9Y2U8 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC21.28■■□□□ 1
LEMD3Q9Y2U8 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC21.28■■□□□ 1
LEMD3Q9Y2U8 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC21.28■■□□□ 1
LEMD3Q9Y2U8 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
LEMD3Q9Y2U8 PDPK2P-202ENST00000562415 1191 ntBASIC21.28■■□□□ 1
LEMD3Q9Y2U8 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC21.28■■□□□ 1
LEMD3Q9Y2U8 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC21.28■■□□□ 1
LEMD3Q9Y2U8 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC21.28■■□□□ 1
LEMD3Q9Y2U8 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
LEMD3Q9Y2U8 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
LEMD3Q9Y2U8 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC21.28■■□□□ 1
LEMD3Q9Y2U8 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC21.28■■□□□ 1
LEMD3Q9Y2U8 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC21.28■■□□□ 1
LEMD3Q9Y2U8 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
LEMD3Q9Y2U8 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
LEMD3Q9Y2U8 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.27■■□□□ 1
LEMD3Q9Y2U8 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC21.27■■□□□ 1
LEMD3Q9Y2U8 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
LEMD3Q9Y2U8 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LEMD3Q9Y2U8 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC21.27■■□□□ 1
LEMD3Q9Y2U8 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC21.27■■□□□ 1
LEMD3Q9Y2U8 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
LEMD3Q9Y2U8 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
LEMD3Q9Y2U8 AC254562.1-201ENST00000417586 456 ntBASIC21.27■■□□□ 1
LEMD3Q9Y2U8 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC21.27■■□□□ 1
LEMD3Q9Y2U8 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC21.27■■□□□ 1
LEMD3Q9Y2U8 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC21.27■■□□□ 1
LEMD3Q9Y2U8 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC21.27■■□□□ 1
LEMD3Q9Y2U8 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC21.27■■□□□ 1
LEMD3Q9Y2U8 CFL1-202ENST00000524553 860 ntTSL 2 BASIC21.27■■□□□ 1
LEMD3Q9Y2U8 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
LEMD3Q9Y2U8 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC21.27■■□□□ 1
LEMD3Q9Y2U8 AL596442.2-201ENST00000610240 980 ntBASIC21.27■■□□□ 1
LEMD3Q9Y2U8 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
LEMD3Q9Y2U8 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC21.27■■□□□ 1
LEMD3Q9Y2U8 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC21.27■■□□□ 1
LEMD3Q9Y2U8 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC21.27■■□□□ 1
LEMD3Q9Y2U8 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC21.27■■□□□ 1
LEMD3Q9Y2U8 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
LEMD3Q9Y2U8 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
LEMD3Q9Y2U8 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC21.27■■□□□ 1
LEMD3Q9Y2U8 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC21.27■■□□□ 1
LEMD3Q9Y2U8 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
LEMD3Q9Y2U8 AMT-250ENST00000637682 1823 ntTSL 5 BASIC21.27■□□□□ 0.99
LEMD3Q9Y2U8 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.27■□□□□ 0.99
LEMD3Q9Y2U8 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
LEMD3Q9Y2U8 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LEMD3Q9Y2U8 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LEMD3Q9Y2U8 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC21.26■□□□□ 0.99
LEMD3Q9Y2U8 PI4KAP1-204ENST00000612579 1703 ntBASIC21.26■□□□□ 0.99
LEMD3Q9Y2U8 PC-214ENST00000628663 1470 ntTSL 5 BASIC21.26■□□□□ 0.99
LEMD3Q9Y2U8 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LEMD3Q9Y2U8 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
LEMD3Q9Y2U8 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
LEMD3Q9Y2U8 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
LEMD3Q9Y2U8 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms