Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VPS9D1Q9Y2B5 MYCLP1-201ENST00000372451 1075 ntBASIC17.56■□□□□ 0.4
VPS9D1Q9Y2B5 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.56■□□□□ 0.4
VPS9D1Q9Y2B5 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC17.56■□□□□ 0.4
VPS9D1Q9Y2B5 NTF6B-201ENST00000591913 560 ntBASIC17.56■□□□□ 0.4
VPS9D1Q9Y2B5 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC17.56■□□□□ 0.4
VPS9D1Q9Y2B5 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC17.56■□□□□ 0.4
VPS9D1Q9Y2B5 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
VPS9D1Q9Y2B5 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
VPS9D1Q9Y2B5 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
VPS9D1Q9Y2B5 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
VPS9D1Q9Y2B5 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
VPS9D1Q9Y2B5 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VPS9D1Q9Y2B5 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VPS9D1Q9Y2B5 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.55■□□□□ 0.4
VPS9D1Q9Y2B5 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.55■□□□□ 0.4
VPS9D1Q9Y2B5 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
VPS9D1Q9Y2B5 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
VPS9D1Q9Y2B5 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VPS9D1Q9Y2B5 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
VPS9D1Q9Y2B5 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
VPS9D1Q9Y2B5 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VPS9D1Q9Y2B5 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC17.55■□□□□ 0.4
VPS9D1Q9Y2B5 PC-208ENST00000529047 1607 ntTSL 3 BASIC17.55■□□□□ 0.4
VPS9D1Q9Y2B5 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.55■□□□□ 0.4
VPS9D1Q9Y2B5 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC17.55■□□□□ 0.4
VPS9D1Q9Y2B5 AC005332.1-201ENST00000577698 1310 ntBASIC17.55■□□□□ 0.4
VPS9D1Q9Y2B5 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC17.55■□□□□ 0.4
VPS9D1Q9Y2B5 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
VPS9D1Q9Y2B5 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VPS9D1Q9Y2B5 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
VPS9D1Q9Y2B5 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VPS9D1Q9Y2B5 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
VPS9D1Q9Y2B5 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VPS9D1Q9Y2B5 CHCHD2P8-201ENST00000429873 447 ntBASIC17.55■□□□□ 0.4
VPS9D1Q9Y2B5 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.55■□□□□ 0.4
VPS9D1Q9Y2B5 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.55■□□□□ 0.4
VPS9D1Q9Y2B5 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.55■□□□□ 0.4
VPS9D1Q9Y2B5 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
VPS9D1Q9Y2B5 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
VPS9D1Q9Y2B5 SIRPAP1-201ENST00000448467 1770 ntBASIC17.55■□□□□ 0.4
VPS9D1Q9Y2B5 AC020916.1-201ENST00000587762 1774 ntBASIC17.55■□□□□ 0.4
VPS9D1Q9Y2B5 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VPS9D1Q9Y2B5 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VPS9D1Q9Y2B5 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
VPS9D1Q9Y2B5 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VPS9D1Q9Y2B5 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VPS9D1Q9Y2B5 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VPS9D1Q9Y2B5 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
VPS9D1Q9Y2B5 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
VPS9D1Q9Y2B5 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
VPS9D1Q9Y2B5 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
VPS9D1Q9Y2B5 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
VPS9D1Q9Y2B5 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VPS9D1Q9Y2B5 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VPS9D1Q9Y2B5 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VPS9D1Q9Y2B5 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VPS9D1Q9Y2B5 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC17.54■□□□□ 0.4
VPS9D1Q9Y2B5 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VPS9D1Q9Y2B5 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.54■□□□□ 0.4
VPS9D1Q9Y2B5 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
VPS9D1Q9Y2B5 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VPS9D1Q9Y2B5 DANCR-204ENST00000444958 709 ntTSL 3 BASIC17.54■□□□□ 0.4
VPS9D1Q9Y2B5 PON3-205ENST00000451904 1053 ntTSL 3 BASIC17.54■□□□□ 0.4
VPS9D1Q9Y2B5 AC087388.1-201ENST00000571370 1112 ntBASIC17.54■□□□□ 0.4
VPS9D1Q9Y2B5 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
VPS9D1Q9Y2B5 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.54■□□□□ 0.4
VPS9D1Q9Y2B5 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
VPS9D1Q9Y2B5 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VPS9D1Q9Y2B5 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
VPS9D1Q9Y2B5 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC17.54■□□□□ 0.4
VPS9D1Q9Y2B5 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.54■□□□□ 0.4
VPS9D1Q9Y2B5 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
VPS9D1Q9Y2B5 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
VPS9D1Q9Y2B5 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
VPS9D1Q9Y2B5 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
VPS9D1Q9Y2B5 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
VPS9D1Q9Y2B5 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
VPS9D1Q9Y2B5 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
VPS9D1Q9Y2B5 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
VPS9D1Q9Y2B5 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VPS9D1Q9Y2B5 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VPS9D1Q9Y2B5 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VPS9D1Q9Y2B5 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
VPS9D1Q9Y2B5 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VPS9D1Q9Y2B5 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VPS9D1Q9Y2B5 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
VPS9D1Q9Y2B5 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.53■□□□□ 0.4
VPS9D1Q9Y2B5 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
VPS9D1Q9Y2B5 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VPS9D1Q9Y2B5 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VPS9D1Q9Y2B5 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
VPS9D1Q9Y2B5 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VPS9D1Q9Y2B5 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VPS9D1Q9Y2B5 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
VPS9D1Q9Y2B5 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.53■□□□□ 0.4
VPS9D1Q9Y2B5 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC17.53■□□□□ 0.4
VPS9D1Q9Y2B5 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC17.53■□□□□ 0.4
VPS9D1Q9Y2B5 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.53■□□□□ 0.4
VPS9D1Q9Y2B5 FAM86EP-206ENST00000510506 987 ntBASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms