Protein–RNA interactions for Protein: Q9UPW6

SATB2, DNA-binding protein SATB2, humanhuman

Predictions only

Length 733 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SATB2Q9UPW6 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SATB2Q9UPW6 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SATB2Q9UPW6 AC009102.3-201ENST00000623118 1491 ntBASIC17.29■□□□□ 0.36
SATB2Q9UPW6 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC17.29■□□□□ 0.36
SATB2Q9UPW6 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SATB2Q9UPW6 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SATB2Q9UPW6 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SATB2Q9UPW6 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SATB2Q9UPW6 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SATB2Q9UPW6 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SATB2Q9UPW6 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SATB2Q9UPW6 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SATB2Q9UPW6 AC126763.1-201ENST00000552015 2118 ntBASIC17.29■□□□□ 0.36
SATB2Q9UPW6 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SATB2Q9UPW6 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SATB2Q9UPW6 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.29■□□□□ 0.36
SATB2Q9UPW6 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.29■□□□□ 0.36
SATB2Q9UPW6 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SATB2Q9UPW6 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SATB2Q9UPW6 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SATB2Q9UPW6 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SATB2Q9UPW6 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.28■□□□□ 0.36
SATB2Q9UPW6 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SATB2Q9UPW6 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SATB2Q9UPW6 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
SATB2Q9UPW6 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SATB2Q9UPW6 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SATB2Q9UPW6 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SATB2Q9UPW6 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.28■□□□□ 0.36
SATB2Q9UPW6 AL499627.1-201ENST00000569373 2188 ntBASIC17.28■□□□□ 0.36
SATB2Q9UPW6 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
SATB2Q9UPW6 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SATB2Q9UPW6 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
SATB2Q9UPW6 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SATB2Q9UPW6 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SATB2Q9UPW6 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SATB2Q9UPW6 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC17.28■□□□□ 0.36
SATB2Q9UPW6 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC17.28■□□□□ 0.36
SATB2Q9UPW6 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC17.28■□□□□ 0.36
SATB2Q9UPW6 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC17.28■□□□□ 0.36
SATB2Q9UPW6 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC17.28■□□□□ 0.36
SATB2Q9UPW6 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.28■□□□□ 0.36
SATB2Q9UPW6 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SATB2Q9UPW6 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SATB2Q9UPW6 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SATB2Q9UPW6 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.28■□□□□ 0.36
SATB2Q9UPW6 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.28■□□□□ 0.36
SATB2Q9UPW6 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SATB2Q9UPW6 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SATB2Q9UPW6 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SATB2Q9UPW6 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SATB2Q9UPW6 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
SATB2Q9UPW6 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SATB2Q9UPW6 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SATB2Q9UPW6 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SATB2Q9UPW6 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SATB2Q9UPW6 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.28■□□□□ 0.36
SATB2Q9UPW6 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SATB2Q9UPW6 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.28■□□□□ 0.36
SATB2Q9UPW6 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SATB2Q9UPW6 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SATB2Q9UPW6 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
SATB2Q9UPW6 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.27■□□□□ 0.36
SATB2Q9UPW6 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
SATB2Q9UPW6 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SATB2Q9UPW6 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SATB2Q9UPW6 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.27■□□□□ 0.36
SATB2Q9UPW6 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SATB2Q9UPW6 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SATB2Q9UPW6 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SATB2Q9UPW6 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SATB2Q9UPW6 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SATB2Q9UPW6 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SATB2Q9UPW6 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SATB2Q9UPW6 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.27■□□□□ 0.36
SATB2Q9UPW6 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SATB2Q9UPW6 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.27■□□□□ 0.36
SATB2Q9UPW6 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SATB2Q9UPW6 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC17.27■□□□□ 0.36
SATB2Q9UPW6 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SATB2Q9UPW6 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SATB2Q9UPW6 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.27■□□□□ 0.35
SATB2Q9UPW6 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.27■□□□□ 0.35
SATB2Q9UPW6 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SATB2Q9UPW6 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.27■□□□□ 0.35
SATB2Q9UPW6 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SATB2Q9UPW6 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SATB2Q9UPW6 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SATB2Q9UPW6 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SATB2Q9UPW6 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SATB2Q9UPW6 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SATB2Q9UPW6 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SATB2Q9UPW6 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SATB2Q9UPW6 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.26■□□□□ 0.35
SATB2Q9UPW6 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SATB2Q9UPW6 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
SATB2Q9UPW6 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.26■□□□□ 0.35
SATB2Q9UPW6 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.26■□□□□ 0.35
SATB2Q9UPW6 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SATB2Q9UPW6 CSF3-203ENST00000394148 622 ntTSL 3 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms