Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.29■□□□□ 0.2
NPIPA1Q9UND3 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.29■□□□□ 0.2
NPIPA1Q9UND3 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.29■□□□□ 0.2
NPIPA1Q9UND3 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPA1Q9UND3 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.29■□□□□ 0.2
NPIPA1Q9UND3 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
NPIPA1Q9UND3 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPA1Q9UND3 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPA1Q9UND3 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPA1Q9UND3 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.29■□□□□ 0.2
NPIPA1Q9UND3 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPA1Q9UND3 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPA1Q9UND3 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.29■□□□□ 0.2
NPIPA1Q9UND3 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.29■□□□□ 0.2
NPIPA1Q9UND3 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.29■□□□□ 0.2
NPIPA1Q9UND3 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.29■□□□□ 0.2
NPIPA1Q9UND3 AL031284.1-201ENST00000419297 478 ntBASIC16.29■□□□□ 0.2
NPIPA1Q9UND3 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
NPIPA1Q9UND3 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPA1Q9UND3 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.29■□□□□ 0.2
NPIPA1Q9UND3 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPA1Q9UND3 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
NPIPA1Q9UND3 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.29■□□□□ 0.2
NPIPA1Q9UND3 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.29■□□□□ 0.2
NPIPA1Q9UND3 MTDHP3-201ENST00000594186 672 ntBASIC16.29■□□□□ 0.2
NPIPA1Q9UND3 AC148477.8-201ENST00000624298 468 ntBASIC16.29■□□□□ 0.2
NPIPA1Q9UND3 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NPIPA1Q9UND3 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.29■□□□□ 0.2
NPIPA1Q9UND3 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPA1Q9UND3 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
NPIPA1Q9UND3 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPA1Q9UND3 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPA1Q9UND3 NOC2LP2-201ENST00000407594 1944 ntBASIC16.29■□□□□ 0.2
NPIPA1Q9UND3 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPA1Q9UND3 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.29■□□□□ 0.2
NPIPA1Q9UND3 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.29■□□□□ 0.2
NPIPA1Q9UND3 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPA1Q9UND3 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPA1Q9UND3 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPA1Q9UND3 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPA1Q9UND3 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
NPIPA1Q9UND3 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPA1Q9UND3 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
NPIPA1Q9UND3 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPA1Q9UND3 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPA1Q9UND3 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.28■□□□□ 0.2
NPIPA1Q9UND3 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.28■□□□□ 0.2
NPIPA1Q9UND3 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPA1Q9UND3 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPA1Q9UND3 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.28■□□□□ 0.2
NPIPA1Q9UND3 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC16.28■□□□□ 0.2
NPIPA1Q9UND3 IL9RP2-201ENST00000423948 1312 ntBASIC16.28■□□□□ 0.2
NPIPA1Q9UND3 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPA1Q9UND3 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPA1Q9UND3 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPA1Q9UND3 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPA1Q9UND3 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
NPIPA1Q9UND3 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPA1Q9UND3 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPA1Q9UND3 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPA1Q9UND3 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPA1Q9UND3 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
NPIPA1Q9UND3 TLE1-202ENST00000376484 666 ntTSL 3 BASIC16.28■□□□□ 0.2
NPIPA1Q9UND3 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC16.28■□□□□ 0.2
NPIPA1Q9UND3 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.28■□□□□ 0.2
NPIPA1Q9UND3 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPA1Q9UND3 MEG3-211ENST00000452514 461 ntTSL 3 BASIC16.28■□□□□ 0.2
NPIPA1Q9UND3 AC093909.1-201ENST00000504731 1122 ntBASIC16.28■□□□□ 0.2
NPIPA1Q9UND3 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.28■□□□□ 0.2
NPIPA1Q9UND3 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC16.28■□□□□ 0.2
NPIPA1Q9UND3 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.28■□□□□ 0.2
NPIPA1Q9UND3 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.28■□□□□ 0.2
NPIPA1Q9UND3 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
NPIPA1Q9UND3 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
NPIPA1Q9UND3 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPA1Q9UND3 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPA1Q9UND3 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPA1Q9UND3 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPA1Q9UND3 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPA1Q9UND3 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPA1Q9UND3 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPA1Q9UND3 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
NPIPA1Q9UND3 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
NPIPA1Q9UND3 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
NPIPA1Q9UND3 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
NPIPA1Q9UND3 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
NPIPA1Q9UND3 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NPIPA1Q9UND3 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.27■□□□□ 0.2
NPIPA1Q9UND3 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.27■□□□□ 0.2
NPIPA1Q9UND3 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.27■□□□□ 0.2
NPIPA1Q9UND3 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
NPIPA1Q9UND3 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NPIPA1Q9UND3 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NPIPA1Q9UND3 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NPIPA1Q9UND3 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC16.27■□□□□ 0.2
NPIPA1Q9UND3 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
NPIPA1Q9UND3 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
NPIPA1Q9UND3 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.27■□□□□ 0.2
NPIPA1Q9UND3 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
NPIPA1Q9UND3 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms