Protein–RNA interactions for Protein: Q9UN81

L1RE1, LINE-1 retrotransposable element ORF1 protein, humanhuman

Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
L1RE1Q9UN81 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
L1RE1Q9UN81 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
L1RE1Q9UN81 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.3■□□□□ 0.68
L1RE1Q9UN81 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC19.3■□□□□ 0.68
L1RE1Q9UN81 AC012615.1-201ENST00000565797 1299 ntBASIC19.3■□□□□ 0.68
L1RE1Q9UN81 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.3■□□□□ 0.68
L1RE1Q9UN81 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.3■□□□□ 0.68
L1RE1Q9UN81 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.3■□□□□ 0.68
L1RE1Q9UN81 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
L1RE1Q9UN81 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
L1RE1Q9UN81 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
L1RE1Q9UN81 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
L1RE1Q9UN81 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
L1RE1Q9UN81 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
L1RE1Q9UN81 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
L1RE1Q9UN81 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
L1RE1Q9UN81 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC19.29■□□□□ 0.68
L1RE1Q9UN81 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC19.29■□□□□ 0.68
L1RE1Q9UN81 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC19.29■□□□□ 0.68
L1RE1Q9UN81 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
L1RE1Q9UN81 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
L1RE1Q9UN81 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
L1RE1Q9UN81 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
L1RE1Q9UN81 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
L1RE1Q9UN81 KRT18P65-201ENST00000439811 1286 ntBASIC19.29■□□□□ 0.68
L1RE1Q9UN81 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.29■□□□□ 0.68
L1RE1Q9UN81 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC19.29■□□□□ 0.68
L1RE1Q9UN81 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.29■□□□□ 0.68
L1RE1Q9UN81 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.29■□□□□ 0.68
L1RE1Q9UN81 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.29■□□□□ 0.68
L1RE1Q9UN81 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.29■□□□□ 0.68
L1RE1Q9UN81 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.29■□□□□ 0.68
L1RE1Q9UN81 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.29■□□□□ 0.68
L1RE1Q9UN81 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
L1RE1Q9UN81 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC19.29■□□□□ 0.68
L1RE1Q9UN81 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.29■□□□□ 0.68
L1RE1Q9UN81 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
L1RE1Q9UN81 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
L1RE1Q9UN81 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC19.29■□□□□ 0.68
L1RE1Q9UN81 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
L1RE1Q9UN81 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
L1RE1Q9UN81 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC19.28■□□□□ 0.68
L1RE1Q9UN81 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
L1RE1Q9UN81 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC19.28■□□□□ 0.68
L1RE1Q9UN81 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
L1RE1Q9UN81 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
L1RE1Q9UN81 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
L1RE1Q9UN81 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC19.28■□□□□ 0.68
L1RE1Q9UN81 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
L1RE1Q9UN81 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
L1RE1Q9UN81 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
L1RE1Q9UN81 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC19.28■□□□□ 0.68
L1RE1Q9UN81 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
L1RE1Q9UN81 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.28■□□□□ 0.68
L1RE1Q9UN81 IGHV3-47-201ENST00000425060 335 ntBASIC19.28■□□□□ 0.68
L1RE1Q9UN81 AC246785.2-201ENST00000432512 513 ntBASIC19.28■□□□□ 0.68
L1RE1Q9UN81 KRT17P6-201ENST00000453795 1220 ntBASIC19.28■□□□□ 0.68
L1RE1Q9UN81 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.28■□□□□ 0.68
L1RE1Q9UN81 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
L1RE1Q9UN81 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
L1RE1Q9UN81 KRT126P-201ENST00000549467 1181 ntBASIC19.28■□□□□ 0.68
L1RE1Q9UN81 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC19.28■□□□□ 0.68
L1RE1Q9UN81 AC074051.2-201ENST00000565115 352 ntBASIC19.28■□□□□ 0.68
L1RE1Q9UN81 AC011840.4-201ENST00000578471 627 ntBASIC19.28■□□□□ 0.68
L1RE1Q9UN81 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
L1RE1Q9UN81 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
L1RE1Q9UN81 Z69720.1-201ENST00000601483 472 ntBASIC19.28■□□□□ 0.68
L1RE1Q9UN81 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
L1RE1Q9UN81 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
L1RE1Q9UN81 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
L1RE1Q9UN81 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
L1RE1Q9UN81 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
L1RE1Q9UN81 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
L1RE1Q9UN81 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
L1RE1Q9UN81 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
L1RE1Q9UN81 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
L1RE1Q9UN81 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.28■□□□□ 0.68
L1RE1Q9UN81 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
L1RE1Q9UN81 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
L1RE1Q9UN81 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
L1RE1Q9UN81 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
L1RE1Q9UN81 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.28■□□□□ 0.68
L1RE1Q9UN81 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
L1RE1Q9UN81 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
L1RE1Q9UN81 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
L1RE1Q9UN81 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.27■□□□□ 0.68
L1RE1Q9UN81 AC006116.8-202ENST00000587620 1550 ntBASIC19.27■□□□□ 0.68
L1RE1Q9UN81 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
L1RE1Q9UN81 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.27■□□□□ 0.68
L1RE1Q9UN81 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.27■□□□□ 0.68
L1RE1Q9UN81 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
L1RE1Q9UN81 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
L1RE1Q9UN81 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
L1RE1Q9UN81 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
L1RE1Q9UN81 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
L1RE1Q9UN81 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
L1RE1Q9UN81 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
L1RE1Q9UN81 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
L1RE1Q9UN81 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC19.27■□□□□ 0.68
L1RE1Q9UN81 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms