Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NOTCH3Q9UM47 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NOTCH3Q9UM47 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
NOTCH3Q9UM47 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC13.64□□□□□ -0.23
NOTCH3Q9UM47 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC13.64□□□□□ -0.23
NOTCH3Q9UM47 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
NOTCH3Q9UM47 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
NOTCH3Q9UM47 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
NOTCH3Q9UM47 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NOTCH3Q9UM47 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NOTCH3Q9UM47 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NOTCH3Q9UM47 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NOTCH3Q9UM47 AP000974.1-201ENST00000623909 2387 ntBASIC13.64□□□□□ -0.23
NOTCH3Q9UM47 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
NOTCH3Q9UM47 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NOTCH3Q9UM47 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NOTCH3Q9UM47 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NOTCH3Q9UM47 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC13.64□□□□□ -0.23
NOTCH3Q9UM47 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
NOTCH3Q9UM47 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
NOTCH3Q9UM47 AC098831.1-202ENST00000438821 336 ntBASIC13.64□□□□□ -0.23
NOTCH3Q9UM47 DNAJB3-201ENST00000446806 729 ntBASIC13.64□□□□□ -0.23
NOTCH3Q9UM47 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC13.64□□□□□ -0.23
NOTCH3Q9UM47 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC13.64□□□□□ -0.23
NOTCH3Q9UM47 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC13.64□□□□□ -0.23
NOTCH3Q9UM47 NKAPP1-205ENST00000585790 367 ntBASIC13.64□□□□□ -0.23
NOTCH3Q9UM47 AL691403.2-201ENST00000618460 490 ntBASIC13.64□□□□□ -0.23
NOTCH3Q9UM47 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC13.64□□□□□ -0.23
NOTCH3Q9UM47 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NOTCH3Q9UM47 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NOTCH3Q9UM47 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NOTCH3Q9UM47 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
NOTCH3Q9UM47 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
NOTCH3Q9UM47 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NOTCH3Q9UM47 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
NOTCH3Q9UM47 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
NOTCH3Q9UM47 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC13.64□□□□□ -0.23
NOTCH3Q9UM47 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
NOTCH3Q9UM47 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
NOTCH3Q9UM47 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NOTCH3Q9UM47 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NOTCH3Q9UM47 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC13.63□□□□□ -0.23
NOTCH3Q9UM47 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
NOTCH3Q9UM47 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NOTCH3Q9UM47 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC13.63□□□□□ -0.23
NOTCH3Q9UM47 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NOTCH3Q9UM47 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NOTCH3Q9UM47 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NOTCH3Q9UM47 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
NOTCH3Q9UM47 MED16-201ENST00000269814 1199 ntTSL 5 BASIC13.63□□□□□ -0.23
NOTCH3Q9UM47 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NOTCH3Q9UM47 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NOTCH3Q9UM47 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
NOTCH3Q9UM47 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NOTCH3Q9UM47 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
NOTCH3Q9UM47 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
NOTCH3Q9UM47 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC13.63□□□□□ -0.23
NOTCH3Q9UM47 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NOTCH3Q9UM47 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
NOTCH3Q9UM47 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC13.63□□□□□ -0.23
NOTCH3Q9UM47 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
NOTCH3Q9UM47 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NOTCH3Q9UM47 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC13.63□□□□□ -0.23
NOTCH3Q9UM47 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC13.63□□□□□ -0.23
NOTCH3Q9UM47 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NOTCH3Q9UM47 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NOTCH3Q9UM47 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NOTCH3Q9UM47 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC13.63□□□□□ -0.23
NOTCH3Q9UM47 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
NOTCH3Q9UM47 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC13.63□□□□□ -0.23
NOTCH3Q9UM47 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NOTCH3Q9UM47 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC13.63□□□□□ -0.23
NOTCH3Q9UM47 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC13.63□□□□□ -0.23
NOTCH3Q9UM47 CFL1-212ENST00000531413 636 ntTSL 3 BASIC13.63□□□□□ -0.23
NOTCH3Q9UM47 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NOTCH3Q9UM47 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC13.63□□□□□ -0.23
NOTCH3Q9UM47 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NOTCH3Q9UM47 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
NOTCH3Q9UM47 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC13.63□□□□□ -0.23
NOTCH3Q9UM47 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NOTCH3Q9UM47 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NOTCH3Q9UM47 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
NOTCH3Q9UM47 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
NOTCH3Q9UM47 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
NOTCH3Q9UM47 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC13.63□□□□□ -0.23
NOTCH3Q9UM47 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NOTCH3Q9UM47 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NOTCH3Q9UM47 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC13.62□□□□□ -0.23
NOTCH3Q9UM47 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
NOTCH3Q9UM47 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NOTCH3Q9UM47 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
NOTCH3Q9UM47 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
NOTCH3Q9UM47 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
NOTCH3Q9UM47 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NOTCH3Q9UM47 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
NOTCH3Q9UM47 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
NOTCH3Q9UM47 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
NOTCH3Q9UM47 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
NOTCH3Q9UM47 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
NOTCH3Q9UM47 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms