Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH9Q9ULB4 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.62■□□□□ 0.57
CDH9Q9ULB4 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CDH9Q9ULB4 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
CDH9Q9ULB4 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CDH9Q9ULB4 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CDH9Q9ULB4 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH9Q9ULB4 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDH9Q9ULB4 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CDH9Q9ULB4 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CDH9Q9ULB4 AC004817.3-201ENST00000602957 2129 ntBASIC18.61■□□□□ 0.57
CDH9Q9ULB4 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDH9Q9ULB4 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH9Q9ULB4 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH9Q9ULB4 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CDH9Q9ULB4 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
CDH9Q9ULB4 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDH9Q9ULB4 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
CDH9Q9ULB4 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC18.61■□□□□ 0.57
CDH9Q9ULB4 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH9Q9ULB4 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CDH9Q9ULB4 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH9Q9ULB4 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC18.61■□□□□ 0.57
CDH9Q9ULB4 SIGLEC30P-201ENST00000455569 941 ntBASIC18.61■□□□□ 0.57
CDH9Q9ULB4 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CDH9Q9ULB4 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC18.61■□□□□ 0.57
CDH9Q9ULB4 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.61■□□□□ 0.57
CDH9Q9ULB4 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.61■□□□□ 0.57
CDH9Q9ULB4 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDH9Q9ULB4 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH9Q9ULB4 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDH9Q9ULB4 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CDH9Q9ULB4 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH9Q9ULB4 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH9Q9ULB4 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH9Q9ULB4 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC18.61■□□□□ 0.57
CDH9Q9ULB4 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
CDH9Q9ULB4 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CDH9Q9ULB4 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CDH9Q9ULB4 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH9Q9ULB4 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH9Q9ULB4 AC148477.5-201ENST00000625164 1645 ntBASIC18.6■□□□□ 0.57
CDH9Q9ULB4 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH9Q9ULB4 AC009336.1-201ENST00000608941 1553 ntBASIC18.6■□□□□ 0.57
CDH9Q9ULB4 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC18.6■□□□□ 0.57
CDH9Q9ULB4 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CDH9Q9ULB4 AC012317.2-201ENST00000623305 2251 ntBASIC18.6■□□□□ 0.57
CDH9Q9ULB4 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH9Q9ULB4 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CDH9Q9ULB4 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CDH9Q9ULB4 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH9Q9ULB4 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.6■□□□□ 0.57
CDH9Q9ULB4 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.6■□□□□ 0.57
CDH9Q9ULB4 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.6■□□□□ 0.57
CDH9Q9ULB4 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CDH9Q9ULB4 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC18.6■□□□□ 0.57
CDH9Q9ULB4 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.6■□□□□ 0.57
CDH9Q9ULB4 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.6■□□□□ 0.57
CDH9Q9ULB4 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.6■□□□□ 0.57
CDH9Q9ULB4 AC107918.4-202ENST00000641623 219 ntBASIC18.6■□□□□ 0.57
CDH9Q9ULB4 AC008764.6-201ENST00000595909 2069 ntBASIC18.6■□□□□ 0.57
CDH9Q9ULB4 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH9Q9ULB4 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.6■□□□□ 0.57
CDH9Q9ULB4 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CDH9Q9ULB4 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CDH9Q9ULB4 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH9Q9ULB4 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CDH9Q9ULB4 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CDH9Q9ULB4 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.6■□□□□ 0.57
CDH9Q9ULB4 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDH9Q9ULB4 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.59■□□□□ 0.57
CDH9Q9ULB4 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDH9Q9ULB4 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDH9Q9ULB4 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CDH9Q9ULB4 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CDH9Q9ULB4 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDH9Q9ULB4 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDH9Q9ULB4 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDH9Q9ULB4 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC18.59■□□□□ 0.57
CDH9Q9ULB4 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDH9Q9ULB4 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.59■□□□□ 0.57
CDH9Q9ULB4 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDH9Q9ULB4 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDH9Q9ULB4 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDH9Q9ULB4 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDH9Q9ULB4 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC18.59■□□□□ 0.57
CDH9Q9ULB4 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDH9Q9ULB4 LAGE3P1-201ENST00000425356 484 ntBASIC18.59■□□□□ 0.57
CDH9Q9ULB4 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.59■□□□□ 0.57
CDH9Q9ULB4 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.59■□□□□ 0.57
CDH9Q9ULB4 MIR7706-201ENST00000613747 67 ntBASIC18.59■□□□□ 0.57
CDH9Q9ULB4 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC18.59■□□□□ 0.57
CDH9Q9ULB4 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CDH9Q9ULB4 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDH9Q9ULB4 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDH9Q9ULB4 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CDH9Q9ULB4 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CDH9Q9ULB4 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
CDH9Q9ULB4 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CDH9Q9ULB4 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms