Protein–RNA interactions for Protein: Q9UBI1

COMMD3, COMM domain-containing protein 3, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3Q9UBI1 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
COMMD3Q9UBI1 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
COMMD3Q9UBI1 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
COMMD3Q9UBI1 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
COMMD3Q9UBI1 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
COMMD3Q9UBI1 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
COMMD3Q9UBI1 AC026691.1-201ENST00000602502 2017 ntBASIC15.55■□□□□ 0.08
COMMD3Q9UBI1 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
COMMD3Q9UBI1 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC15.55■□□□□ 0.08
COMMD3Q9UBI1 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
COMMD3Q9UBI1 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
COMMD3Q9UBI1 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
COMMD3Q9UBI1 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
COMMD3Q9UBI1 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
COMMD3Q9UBI1 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
COMMD3Q9UBI1 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
COMMD3Q9UBI1 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
COMMD3Q9UBI1 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
COMMD3Q9UBI1 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
COMMD3Q9UBI1 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
COMMD3Q9UBI1 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
COMMD3Q9UBI1 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
COMMD3Q9UBI1 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC15.55■□□□□ 0.08
COMMD3Q9UBI1 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
COMMD3Q9UBI1 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
COMMD3Q9UBI1 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC15.55■□□□□ 0.08
COMMD3Q9UBI1 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC15.55■□□□□ 0.08
COMMD3Q9UBI1 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC15.55■□□□□ 0.08
COMMD3Q9UBI1 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
COMMD3Q9UBI1 LINC01451-201ENST00000623792 534 ntBASIC15.55■□□□□ 0.08
COMMD3Q9UBI1 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.55■□□□□ 0.08
COMMD3Q9UBI1 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
COMMD3Q9UBI1 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
COMMD3Q9UBI1 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC15.55■□□□□ 0.08
COMMD3Q9UBI1 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC15.55■□□□□ 0.08
COMMD3Q9UBI1 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
COMMD3Q9UBI1 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
COMMD3Q9UBI1 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
COMMD3Q9UBI1 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.55■□□□□ 0.08
COMMD3Q9UBI1 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
COMMD3Q9UBI1 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
COMMD3Q9UBI1 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
COMMD3Q9UBI1 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
COMMD3Q9UBI1 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
COMMD3Q9UBI1 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
COMMD3Q9UBI1 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COMMD3Q9UBI1 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.54■□□□□ 0.08
COMMD3Q9UBI1 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC15.54■□□□□ 0.08
COMMD3Q9UBI1 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COMMD3Q9UBI1 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
COMMD3Q9UBI1 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
COMMD3Q9UBI1 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COMMD3Q9UBI1 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
COMMD3Q9UBI1 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COMMD3Q9UBI1 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COMMD3Q9UBI1 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.54■□□□□ 0.08
COMMD3Q9UBI1 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COMMD3Q9UBI1 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC15.54■□□□□ 0.08
COMMD3Q9UBI1 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
COMMD3Q9UBI1 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COMMD3Q9UBI1 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC15.54■□□□□ 0.08
COMMD3Q9UBI1 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COMMD3Q9UBI1 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COMMD3Q9UBI1 CDCA4P2-201ENST00000441182 718 ntBASIC15.54■□□□□ 0.08
COMMD3Q9UBI1 AC026185.1-201ENST00000445748 174 ntBASIC15.54■□□□□ 0.08
COMMD3Q9UBI1 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC15.54■□□□□ 0.08
COMMD3Q9UBI1 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
COMMD3Q9UBI1 TK2-208ENST00000545043 1120 ntTSL 2 BASIC15.54■□□□□ 0.08
COMMD3Q9UBI1 NAT14-202ENST00000587400 416 ntTSL 5 BASIC15.54■□□□□ 0.08
COMMD3Q9UBI1 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC15.54■□□□□ 0.08
COMMD3Q9UBI1 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC15.54■□□□□ 0.08
COMMD3Q9UBI1 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.54■□□□□ 0.08
COMMD3Q9UBI1 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COMMD3Q9UBI1 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC15.54■□□□□ 0.08
COMMD3Q9UBI1 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC15.54■□□□□ 0.08
COMMD3Q9UBI1 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
COMMD3Q9UBI1 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COMMD3Q9UBI1 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
COMMD3Q9UBI1 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC15.54■□□□□ 0.08
COMMD3Q9UBI1 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC15.54■□□□□ 0.08
COMMD3Q9UBI1 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
COMMD3Q9UBI1 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.54■□□□□ 0.08
COMMD3Q9UBI1 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COMMD3Q9UBI1 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
COMMD3Q9UBI1 AC036111.1-201ENST00000533973 1582 ntBASIC15.53■□□□□ 0.08
COMMD3Q9UBI1 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
COMMD3Q9UBI1 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.53■□□□□ 0.08
COMMD3Q9UBI1 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
COMMD3Q9UBI1 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
COMMD3Q9UBI1 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
COMMD3Q9UBI1 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
COMMD3Q9UBI1 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
COMMD3Q9UBI1 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
COMMD3Q9UBI1 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
COMMD3Q9UBI1 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC15.53■□□□□ 0.08
COMMD3Q9UBI1 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
COMMD3Q9UBI1 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
COMMD3Q9UBI1 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
COMMD3Q9UBI1 REXO1L11P-201ENST00000620964 1927 ntBASIC15.53■□□□□ 0.08
COMMD3Q9UBI1 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms