Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 AC005829.1-201ENST00000570002 483 ntBASIC18.34■□□□□ 0.53
DNMT3BQ9UBC3 STK25P1-201ENST00000585406 838 ntBASIC18.34■□□□□ 0.53
DNMT3BQ9UBC3 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.34■□□□□ 0.53
DNMT3BQ9UBC3 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
DNMT3BQ9UBC3 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DNMT3BQ9UBC3 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
DNMT3BQ9UBC3 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DNMT3BQ9UBC3 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
DNMT3BQ9UBC3 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
DNMT3BQ9UBC3 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
DNMT3BQ9UBC3 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.34■□□□□ 0.53
DNMT3BQ9UBC3 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.34■□□□□ 0.53
DNMT3BQ9UBC3 AC005332.8-201ENST00000622750 2735 ntBASIC18.34■□□□□ 0.53
DNMT3BQ9UBC3 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DNMT3BQ9UBC3 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DNMT3BQ9UBC3 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
DNMT3BQ9UBC3 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
DNMT3BQ9UBC3 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
DNMT3BQ9UBC3 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.33■□□□□ 0.53
DNMT3BQ9UBC3 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.33■□□□□ 0.53
DNMT3BQ9UBC3 AC002310.6-201ENST00000624451 1377 ntBASIC18.33■□□□□ 0.53
DNMT3BQ9UBC3 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
DNMT3BQ9UBC3 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
DNMT3BQ9UBC3 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.33■□□□□ 0.53
DNMT3BQ9UBC3 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC18.33■□□□□ 0.52
DNMT3BQ9UBC3 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC18.33■□□□□ 0.52
DNMT3BQ9UBC3 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
DNMT3BQ9UBC3 STK19B-204ENST00000512515 211 ntBASIC18.33■□□□□ 0.52
DNMT3BQ9UBC3 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
DNMT3BQ9UBC3 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.33■□□□□ 0.52
DNMT3BQ9UBC3 AC027796.2-201ENST00000575326 344 ntBASIC18.33■□□□□ 0.52
DNMT3BQ9UBC3 AC116407.2-201ENST00000613639 860 ntBASIC18.33■□□□□ 0.52
DNMT3BQ9UBC3 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
DNMT3BQ9UBC3 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.33■□□□□ 0.52
DNMT3BQ9UBC3 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DNMT3BQ9UBC3 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC18.33■□□□□ 0.52
DNMT3BQ9UBC3 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.52
DNMT3BQ9UBC3 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.33■□□□□ 0.52
DNMT3BQ9UBC3 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
DNMT3BQ9UBC3 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
DNMT3BQ9UBC3 BX276092.7-203ENST00000637198 1536 ntBASIC18.33■□□□□ 0.52
DNMT3BQ9UBC3 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.33■□□□□ 0.52
DNMT3BQ9UBC3 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.32■□□□□ 0.52
DNMT3BQ9UBC3 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
DNMT3BQ9UBC3 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DNMT3BQ9UBC3 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC18.32■□□□□ 0.52
DNMT3BQ9UBC3 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DNMT3BQ9UBC3 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.32■□□□□ 0.52
DNMT3BQ9UBC3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
DNMT3BQ9UBC3 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
DNMT3BQ9UBC3 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DNMT3BQ9UBC3 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
DNMT3BQ9UBC3 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.32■□□□□ 0.52
DNMT3BQ9UBC3 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
DNMT3BQ9UBC3 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.32■□□□□ 0.52
DNMT3BQ9UBC3 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.32■□□□□ 0.52
DNMT3BQ9UBC3 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
DNMT3BQ9UBC3 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
DNMT3BQ9UBC3 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.32■□□□□ 0.52
DNMT3BQ9UBC3 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.32■□□□□ 0.52
DNMT3BQ9UBC3 HMGN1P19-201ENST00000436976 333 ntBASIC18.32■□□□□ 0.52
DNMT3BQ9UBC3 PRSS29P-201ENST00000440800 595 ntBASIC18.32■□□□□ 0.52
DNMT3BQ9UBC3 AP006288.1-201ENST00000446065 395 ntBASIC18.32■□□□□ 0.52
DNMT3BQ9UBC3 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
DNMT3BQ9UBC3 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.32■□□□□ 0.52
DNMT3BQ9UBC3 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC18.32■□□□□ 0.52
DNMT3BQ9UBC3 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC18.32■□□□□ 0.52
DNMT3BQ9UBC3 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.32■□□□□ 0.52
DNMT3BQ9UBC3 AL355385.1-201ENST00000606123 409 ntBASIC18.32■□□□□ 0.52
DNMT3BQ9UBC3 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC18.32■□□□□ 0.52
DNMT3BQ9UBC3 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
DNMT3BQ9UBC3 BICD1-207ENST00000551848 1962 ntBASIC18.31■□□□□ 0.52
DNMT3BQ9UBC3 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC18.31■□□□□ 0.52
DNMT3BQ9UBC3 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DNMT3BQ9UBC3 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DNMT3BQ9UBC3 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DNMT3BQ9UBC3 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.31■□□□□ 0.52
DNMT3BQ9UBC3 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC18.31■□□□□ 0.52
DNMT3BQ9UBC3 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.31■□□□□ 0.52
DNMT3BQ9UBC3 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
DNMT3BQ9UBC3 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.31■□□□□ 0.52
DNMT3BQ9UBC3 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.31■□□□□ 0.52
DNMT3BQ9UBC3 ALG1L5P-201ENST00000482043 771 ntBASIC18.31■□□□□ 0.52
DNMT3BQ9UBC3 MAL2-202ENST00000531508 892 ntTSL 3 BASIC18.31■□□□□ 0.52
DNMT3BQ9UBC3 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
DNMT3BQ9UBC3 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DNMT3BQ9UBC3 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
DNMT3BQ9UBC3 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
DNMT3BQ9UBC3 AL596442.2-201ENST00000610240 980 ntBASIC18.31■□□□□ 0.52
DNMT3BQ9UBC3 AL513190.1-201ENST00000621254 727 ntBASIC18.31■□□□□ 0.52
DNMT3BQ9UBC3 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
DNMT3BQ9UBC3 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DNMT3BQ9UBC3 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
DNMT3BQ9UBC3 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
DNMT3BQ9UBC3 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
DNMT3BQ9UBC3 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
DNMT3BQ9UBC3 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
DNMT3BQ9UBC3 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
DNMT3BQ9UBC3 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
DNMT3BQ9UBC3 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms