Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.08■□□□□ 0.32
CUEDC1Q9NWM3 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CUEDC1Q9NWM3 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC17.08■□□□□ 0.32
CUEDC1Q9NWM3 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.08■□□□□ 0.32
CUEDC1Q9NWM3 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.08■□□□□ 0.32
CUEDC1Q9NWM3 AC099336.1-202ENST00000602961 463 ntBASIC17.08■□□□□ 0.32
CUEDC1Q9NWM3 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.08■□□□□ 0.32
CUEDC1Q9NWM3 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CUEDC1Q9NWM3 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CUEDC1Q9NWM3 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CUEDC1Q9NWM3 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.08■□□□□ 0.32
CUEDC1Q9NWM3 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
CUEDC1Q9NWM3 REXO1L11P-201ENST00000620964 1927 ntBASIC17.08■□□□□ 0.32
CUEDC1Q9NWM3 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC17.07■□□□□ 0.32
CUEDC1Q9NWM3 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.07■□□□□ 0.32
CUEDC1Q9NWM3 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CUEDC1Q9NWM3 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CUEDC1Q9NWM3 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CUEDC1Q9NWM3 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CUEDC1Q9NWM3 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CUEDC1Q9NWM3 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CUEDC1Q9NWM3 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.07■□□□□ 0.32
CUEDC1Q9NWM3 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CUEDC1Q9NWM3 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC17.07■□□□□ 0.32
CUEDC1Q9NWM3 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC17.07■□□□□ 0.32
CUEDC1Q9NWM3 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC17.07■□□□□ 0.32
CUEDC1Q9NWM3 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CUEDC1Q9NWM3 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.07■□□□□ 0.32
CUEDC1Q9NWM3 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CUEDC1Q9NWM3 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC17.07■□□□□ 0.32
CUEDC1Q9NWM3 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.07■□□□□ 0.32
CUEDC1Q9NWM3 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CUEDC1Q9NWM3 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CUEDC1Q9NWM3 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CUEDC1Q9NWM3 AL355312.1-201ENST00000407115 2176 ntBASIC17.07■□□□□ 0.32
CUEDC1Q9NWM3 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CUEDC1Q9NWM3 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CUEDC1Q9NWM3 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CUEDC1Q9NWM3 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
CUEDC1Q9NWM3 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CUEDC1Q9NWM3 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.07■□□□□ 0.32
CUEDC1Q9NWM3 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.07■□□□□ 0.32
CUEDC1Q9NWM3 UNC93B7-201ENST00000509439 705 ntBASIC17.07■□□□□ 0.32
CUEDC1Q9NWM3 AC096582.2-201ENST00000510860 516 ntBASIC17.07■□□□□ 0.32
CUEDC1Q9NWM3 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CUEDC1Q9NWM3 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
CUEDC1Q9NWM3 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CUEDC1Q9NWM3 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.07■□□□□ 0.32
CUEDC1Q9NWM3 LINC01711-201ENST00000598340 967 ntBASIC17.07■□□□□ 0.32
CUEDC1Q9NWM3 AC138894.3-201ENST00000603787 634 ntBASIC17.07■□□□□ 0.32
CUEDC1Q9NWM3 AC117500.6-201ENST00000624871 588 ntBASIC17.07■□□□□ 0.32
CUEDC1Q9NWM3 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
CUEDC1Q9NWM3 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CUEDC1Q9NWM3 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CUEDC1Q9NWM3 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.07■□□□□ 0.32
CUEDC1Q9NWM3 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CUEDC1Q9NWM3 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CUEDC1Q9NWM3 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CUEDC1Q9NWM3 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CUEDC1Q9NWM3 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
CUEDC1Q9NWM3 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CUEDC1Q9NWM3 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CUEDC1Q9NWM3 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.06■□□□□ 0.32
CUEDC1Q9NWM3 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
CUEDC1Q9NWM3 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CUEDC1Q9NWM3 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CUEDC1Q9NWM3 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CUEDC1Q9NWM3 TP73-AS1-210ENST00000637775 1455 ntBASIC17.06■□□□□ 0.32
CUEDC1Q9NWM3 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CUEDC1Q9NWM3 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CUEDC1Q9NWM3 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.06■□□□□ 0.32
CUEDC1Q9NWM3 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.06■□□□□ 0.32
CUEDC1Q9NWM3 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CUEDC1Q9NWM3 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
CUEDC1Q9NWM3 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CUEDC1Q9NWM3 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CUEDC1Q9NWM3 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.06■□□□□ 0.32
CUEDC1Q9NWM3 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CUEDC1Q9NWM3 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CUEDC1Q9NWM3 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CUEDC1Q9NWM3 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CUEDC1Q9NWM3 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CUEDC1Q9NWM3 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.06■□□□□ 0.32
CUEDC1Q9NWM3 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.06■□□□□ 0.32
CUEDC1Q9NWM3 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CUEDC1Q9NWM3 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
CUEDC1Q9NWM3 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.06■□□□□ 0.32
CUEDC1Q9NWM3 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CUEDC1Q9NWM3 AL160237.2-201ENST00000556165 472 ntBASIC17.06■□□□□ 0.32
CUEDC1Q9NWM3 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.06■□□□□ 0.32
CUEDC1Q9NWM3 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.06■□□□□ 0.32
CUEDC1Q9NWM3 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC17.06■□□□□ 0.32
CUEDC1Q9NWM3 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.06■□□□□ 0.32
CUEDC1Q9NWM3 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.06■□□□□ 0.32
CUEDC1Q9NWM3 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.06■□□□□ 0.32
CUEDC1Q9NWM3 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CUEDC1Q9NWM3 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
CUEDC1Q9NWM3 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CUEDC1Q9NWM3 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CUEDC1Q9NWM3 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms