Protein–RNA interactions for Protein: Q9NRR5

UBQLN4, Ubiquilin-4, humanhuman

Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4Q9NRR5 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
UBQLN4Q9NRR5 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBQLN4Q9NRR5 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBQLN4Q9NRR5 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBQLN4Q9NRR5 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
UBQLN4Q9NRR5 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.24■□□□□ 0.19
UBQLN4Q9NRR5 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.24■□□□□ 0.19
UBQLN4Q9NRR5 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.24■□□□□ 0.19
UBQLN4Q9NRR5 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.24■□□□□ 0.19
UBQLN4Q9NRR5 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
UBQLN4Q9NRR5 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
UBQLN4Q9NRR5 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.24■□□□□ 0.19
UBQLN4Q9NRR5 AC092119.3-201ENST00000612618 583 ntBASIC16.24■□□□□ 0.19
UBQLN4Q9NRR5 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.24■□□□□ 0.19
UBQLN4Q9NRR5 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
UBQLN4Q9NRR5 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.24■□□□□ 0.19
UBQLN4Q9NRR5 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.24■□□□□ 0.19
UBQLN4Q9NRR5 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.24■□□□□ 0.19
UBQLN4Q9NRR5 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBQLN4Q9NRR5 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBQLN4Q9NRR5 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
UBQLN4Q9NRR5 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBQLN4Q9NRR5 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBQLN4Q9NRR5 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
UBQLN4Q9NRR5 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
UBQLN4Q9NRR5 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBQLN4Q9NRR5 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBQLN4Q9NRR5 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBQLN4Q9NRR5 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
UBQLN4Q9NRR5 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
UBQLN4Q9NRR5 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBQLN4Q9NRR5 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBQLN4Q9NRR5 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.23■□□□□ 0.19
UBQLN4Q9NRR5 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.23■□□□□ 0.19
UBQLN4Q9NRR5 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
UBQLN4Q9NRR5 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
UBQLN4Q9NRR5 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBQLN4Q9NRR5 AC103564.2-201ENST00000432853 1299 ntBASIC16.23■□□□□ 0.19
UBQLN4Q9NRR5 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
UBQLN4Q9NRR5 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC16.23■□□□□ 0.19
UBQLN4Q9NRR5 AC002558.1-201ENST00000488906 803 ntBASIC16.23■□□□□ 0.19
UBQLN4Q9NRR5 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.23■□□□□ 0.19
UBQLN4Q9NRR5 AC104819.1-201ENST00000504587 486 ntBASIC16.23■□□□□ 0.19
UBQLN4Q9NRR5 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.23■□□□□ 0.19
UBQLN4Q9NRR5 CDV3-207ENST00000508481 661 ntTSL 3 BASIC16.23■□□□□ 0.19
UBQLN4Q9NRR5 AP000867.3-201ENST00000524675 377 ntBASIC16.23■□□□□ 0.19
UBQLN4Q9NRR5 AC074051.2-201ENST00000565115 352 ntBASIC16.23■□□□□ 0.19
UBQLN4Q9NRR5 AC012615.1-201ENST00000565797 1299 ntBASIC16.23■□□□□ 0.19
UBQLN4Q9NRR5 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.23■□□□□ 0.19
UBQLN4Q9NRR5 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.23■□□□□ 0.19
UBQLN4Q9NRR5 NSUN5P1-202ENST00000421140 1535 ntBASIC16.23■□□□□ 0.19
UBQLN4Q9NRR5 NSUN5P2-203ENST00000457352 1529 ntBASIC16.23■□□□□ 0.19
UBQLN4Q9NRR5 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
UBQLN4Q9NRR5 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
UBQLN4Q9NRR5 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
UBQLN4Q9NRR5 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
UBQLN4Q9NRR5 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBQLN4Q9NRR5 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
UBQLN4Q9NRR5 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
UBQLN4Q9NRR5 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
UBQLN4Q9NRR5 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
UBQLN4Q9NRR5 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.22■□□□□ 0.19
UBQLN4Q9NRR5 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.22■□□□□ 0.19
UBQLN4Q9NRR5 AL138688.1-201ENST00000624851 1594 ntBASIC16.22■□□□□ 0.19
UBQLN4Q9NRR5 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.22■□□□□ 0.19
UBQLN4Q9NRR5 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.22■□□□□ 0.19
UBQLN4Q9NRR5 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.22■□□□□ 0.19
UBQLN4Q9NRR5 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBQLN4Q9NRR5 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.19
UBQLN4Q9NRR5 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
UBQLN4Q9NRR5 CD9-202ENST00000382515 1229 ntTSL 5 BASIC16.22■□□□□ 0.19
UBQLN4Q9NRR5 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
UBQLN4Q9NRR5 IGHV3-47-201ENST00000425060 335 ntBASIC16.22■□□□□ 0.19
UBQLN4Q9NRR5 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC16.22■□□□□ 0.19
UBQLN4Q9NRR5 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC16.22■□□□□ 0.19
UBQLN4Q9NRR5 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
UBQLN4Q9NRR5 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.22■□□□□ 0.19
UBQLN4Q9NRR5 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
UBQLN4Q9NRR5 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
UBQLN4Q9NRR5 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC16.22■□□□□ 0.19
UBQLN4Q9NRR5 AC011467.2-201ENST00000598425 242 ntBASIC16.22■□□□□ 0.19
UBQLN4Q9NRR5 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.22■□□□□ 0.19
UBQLN4Q9NRR5 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.22■□□□□ 0.19
UBQLN4Q9NRR5 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.22■□□□□ 0.19
UBQLN4Q9NRR5 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
UBQLN4Q9NRR5 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBQLN4Q9NRR5 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBQLN4Q9NRR5 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC16.22■□□□□ 0.19
UBQLN4Q9NRR5 TP73-AS1-210ENST00000637775 1455 ntBASIC16.22■□□□□ 0.19
UBQLN4Q9NRR5 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
UBQLN4Q9NRR5 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.22■□□□□ 0.19
UBQLN4Q9NRR5 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
UBQLN4Q9NRR5 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBQLN4Q9NRR5 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBQLN4Q9NRR5 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBQLN4Q9NRR5 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
UBQLN4Q9NRR5 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.21■□□□□ 0.19
UBQLN4Q9NRR5 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
UBQLN4Q9NRR5 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
UBQLN4Q9NRR5 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms