Protein–RNA interactions for Protein: Q9NQ89

C12orf4, Protein C12orf4, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf4Q9NQ89 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.42■□□□□ 0.06
C12orf4Q9NQ89 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC15.42■□□□□ 0.06
C12orf4Q9NQ89 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
C12orf4Q9NQ89 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
C12orf4Q9NQ89 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
C12orf4Q9NQ89 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
C12orf4Q9NQ89 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
C12orf4Q9NQ89 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
C12orf4Q9NQ89 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.06
C12orf4Q9NQ89 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
C12orf4Q9NQ89 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
C12orf4Q9NQ89 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC15.41■□□□□ 0.06
C12orf4Q9NQ89 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
C12orf4Q9NQ89 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
C12orf4Q9NQ89 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
C12orf4Q9NQ89 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
C12orf4Q9NQ89 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
C12orf4Q9NQ89 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
C12orf4Q9NQ89 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
C12orf4Q9NQ89 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.41■□□□□ 0.06
C12orf4Q9NQ89 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
C12orf4Q9NQ89 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC15.41■□□□□ 0.06
C12orf4Q9NQ89 FAM197Y1-201ENST00000421178 764 ntBASIC15.41■□□□□ 0.06
C12orf4Q9NQ89 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
C12orf4Q9NQ89 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
C12orf4Q9NQ89 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC15.41■□□□□ 0.06
C12orf4Q9NQ89 CA15P1-201ENST00000481698 905 ntBASIC15.41■□□□□ 0.06
C12orf4Q9NQ89 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC15.41■□□□□ 0.06
C12orf4Q9NQ89 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC15.41■□□□□ 0.06
C12orf4Q9NQ89 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC15.41■□□□□ 0.06
C12orf4Q9NQ89 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC15.41■□□□□ 0.06
C12orf4Q9NQ89 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC15.41■□□□□ 0.06
C12orf4Q9NQ89 SLC25A1P4-201ENST00000567977 778 ntBASIC15.41■□□□□ 0.06
C12orf4Q9NQ89 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC15.41■□□□□ 0.06
C12orf4Q9NQ89 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
C12orf4Q9NQ89 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.41■□□□□ 0.06
C12orf4Q9NQ89 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
C12orf4Q9NQ89 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
C12orf4Q9NQ89 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.41■□□□□ 0.06
C12orf4Q9NQ89 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
C12orf4Q9NQ89 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.41■□□□□ 0.06
C12orf4Q9NQ89 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
C12orf4Q9NQ89 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
C12orf4Q9NQ89 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
C12orf4Q9NQ89 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
C12orf4Q9NQ89 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
C12orf4Q9NQ89 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
C12orf4Q9NQ89 AL365209.1-201ENST00000624418 6473 ntBASIC15.4■□□□□ 0.06
C12orf4Q9NQ89 AC009102.3-201ENST00000623118 1491 ntBASIC15.4■□□□□ 0.06
C12orf4Q9NQ89 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
C12orf4Q9NQ89 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC15.4■□□□□ 0.06
C12orf4Q9NQ89 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
C12orf4Q9NQ89 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC15.4■□□□□ 0.06
C12orf4Q9NQ89 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
C12orf4Q9NQ89 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.4■□□□□ 0.06
C12orf4Q9NQ89 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
C12orf4Q9NQ89 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
C12orf4Q9NQ89 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
C12orf4Q9NQ89 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
C12orf4Q9NQ89 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
C12orf4Q9NQ89 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC15.4■□□□□ 0.06
C12orf4Q9NQ89 CD99P1-205ENST00000527459 561 ntBASIC15.4■□□□□ 0.06
C12orf4Q9NQ89 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
C12orf4Q9NQ89 CD177P1-201ENST00000606252 935 ntBASIC15.4■□□□□ 0.06
C12orf4Q9NQ89 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
C12orf4Q9NQ89 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
C12orf4Q9NQ89 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
C12orf4Q9NQ89 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
C12orf4Q9NQ89 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
C12orf4Q9NQ89 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC15.4■□□□□ 0.06
C12orf4Q9NQ89 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC15.4■□□□□ 0.06
C12orf4Q9NQ89 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
C12orf4Q9NQ89 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
C12orf4Q9NQ89 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC15.4■□□□□ 0.06
C12orf4Q9NQ89 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
C12orf4Q9NQ89 SRI-203ENST00000419179 1307 ntTSL 2 BASIC15.4■□□□□ 0.06
C12orf4Q9NQ89 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
C12orf4Q9NQ89 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
C12orf4Q9NQ89 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC15.4■□□□□ 0.06
C12orf4Q9NQ89 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC15.4■□□□□ 0.06
C12orf4Q9NQ89 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
C12orf4Q9NQ89 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.4■□□□□ 0.06
C12orf4Q9NQ89 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
C12orf4Q9NQ89 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC15.4■□□□□ 0.06
C12orf4Q9NQ89 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
C12orf4Q9NQ89 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC15.39■□□□□ 0.05
C12orf4Q9NQ89 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
C12orf4Q9NQ89 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
C12orf4Q9NQ89 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
C12orf4Q9NQ89 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
C12orf4Q9NQ89 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
C12orf4Q9NQ89 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.39■□□□□ 0.05
C12orf4Q9NQ89 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
C12orf4Q9NQ89 AGK-211ENST00000629555 2765 ntTSL 5 BASIC15.39■□□□□ 0.05
C12orf4Q9NQ89 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
C12orf4Q9NQ89 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.39■□□□□ 0.05
C12orf4Q9NQ89 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.39■□□□□ 0.05
C12orf4Q9NQ89 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.39■□□□□ 0.05
C12orf4Q9NQ89 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
C12orf4Q9NQ89 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms