Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
VTA1Q9NP79 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.64■□□□□ 0.74
VTA1Q9NP79 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
VTA1Q9NP79 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC19.64■□□□□ 0.74
VTA1Q9NP79 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
VTA1Q9NP79 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
VTA1Q9NP79 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VTA1Q9NP79 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC19.64■□□□□ 0.73
VTA1Q9NP79 HTR5BP-201ENST00000430851 1154 ntBASIC19.64■□□□□ 0.73
VTA1Q9NP79 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VTA1Q9NP79 POLD4-207ENST00000531239 584 ntTSL 2 BASIC19.64■□□□□ 0.73
VTA1Q9NP79 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC19.64■□□□□ 0.73
VTA1Q9NP79 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
VTA1Q9NP79 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VTA1Q9NP79 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.64■□□□□ 0.73
VTA1Q9NP79 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC19.64■□□□□ 0.73
VTA1Q9NP79 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
VTA1Q9NP79 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VTA1Q9NP79 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
VTA1Q9NP79 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VTA1Q9NP79 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
VTA1Q9NP79 TNXA-203ENST00000507684 2038 ntBASIC19.64■□□□□ 0.73
VTA1Q9NP79 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VTA1Q9NP79 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
VTA1Q9NP79 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
VTA1Q9NP79 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
VTA1Q9NP79 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
VTA1Q9NP79 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
VTA1Q9NP79 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
VTA1Q9NP79 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VTA1Q9NP79 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
VTA1Q9NP79 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
VTA1Q9NP79 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC19.63■□□□□ 0.73
VTA1Q9NP79 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC19.63■□□□□ 0.73
VTA1Q9NP79 PDPK2P-202ENST00000562415 1191 ntBASIC19.63■□□□□ 0.73
VTA1Q9NP79 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC19.63■□□□□ 0.73
VTA1Q9NP79 OR7E47P-204ENST00000575924 449 ntBASIC19.63■□□□□ 0.73
VTA1Q9NP79 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC19.63■□□□□ 0.73
VTA1Q9NP79 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC19.63■□□□□ 0.73
VTA1Q9NP79 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VTA1Q9NP79 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VTA1Q9NP79 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VTA1Q9NP79 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.63■□□□□ 0.73
VTA1Q9NP79 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VTA1Q9NP79 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VTA1Q9NP79 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
VTA1Q9NP79 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VTA1Q9NP79 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VTA1Q9NP79 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VTA1Q9NP79 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
VTA1Q9NP79 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VTA1Q9NP79 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VTA1Q9NP79 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
VTA1Q9NP79 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VTA1Q9NP79 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
VTA1Q9NP79 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
VTA1Q9NP79 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VTA1Q9NP79 AC254562.1-201ENST00000417586 456 ntBASIC19.62■□□□□ 0.73
VTA1Q9NP79 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
VTA1Q9NP79 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC19.62■□□□□ 0.73
VTA1Q9NP79 RHOQP3-201ENST00000437982 621 ntBASIC19.62■□□□□ 0.73
VTA1Q9NP79 CFL1-202ENST00000524553 860 ntTSL 2 BASIC19.62■□□□□ 0.73
VTA1Q9NP79 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC19.62■□□□□ 0.73
VTA1Q9NP79 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VTA1Q9NP79 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC19.62■□□□□ 0.73
VTA1Q9NP79 AL596442.2-201ENST00000610240 980 ntBASIC19.62■□□□□ 0.73
VTA1Q9NP79 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
VTA1Q9NP79 AC004877.2-201ENST00000623941 599 ntBASIC19.62■□□□□ 0.73
VTA1Q9NP79 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VTA1Q9NP79 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VTA1Q9NP79 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
VTA1Q9NP79 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VTA1Q9NP79 AC098818.2-201ENST00000564925 2320 ntBASIC19.62■□□□□ 0.73
VTA1Q9NP79 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
VTA1Q9NP79 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VTA1Q9NP79 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.61■□□□□ 0.73
VTA1Q9NP79 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VTA1Q9NP79 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VTA1Q9NP79 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.61■□□□□ 0.73
VTA1Q9NP79 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VTA1Q9NP79 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VTA1Q9NP79 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VTA1Q9NP79 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
VTA1Q9NP79 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.61■□□□□ 0.73
VTA1Q9NP79 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VTA1Q9NP79 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.61■□□□□ 0.73
VTA1Q9NP79 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VTA1Q9NP79 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC19.61■□□□□ 0.73
VTA1Q9NP79 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC19.61■□□□□ 0.73
VTA1Q9NP79 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC19.61■□□□□ 0.73
VTA1Q9NP79 SNHG9-202ENST00000564014 471 ntBASIC19.61■□□□□ 0.73
VTA1Q9NP79 AC027796.2-201ENST00000575326 344 ntBASIC19.61■□□□□ 0.73
VTA1Q9NP79 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.61■□□□□ 0.73
VTA1Q9NP79 AL078644.1-201ENST00000609881 752 ntBASIC19.61■□□□□ 0.73
VTA1Q9NP79 AQP6-205ENST00000618286 829 ntTSL 5 BASIC19.61■□□□□ 0.73
VTA1Q9NP79 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VTA1Q9NP79 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VTA1Q9NP79 AC090164.3-201ENST00000610780 2143 ntBASIC19.61■□□□□ 0.73
VTA1Q9NP79 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.61■□□□□ 0.73
VTA1Q9NP79 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms