Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NEUROD4Q9HD90 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.68■□□□□ 0.26
NEUROD4Q9HD90 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.68■□□□□ 0.26
NEUROD4Q9HD90 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.68■□□□□ 0.26
NEUROD4Q9HD90 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NEUROD4Q9HD90 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NEUROD4Q9HD90 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NEUROD4Q9HD90 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
NEUROD4Q9HD90 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
NEUROD4Q9HD90 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
NEUROD4Q9HD90 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NEUROD4Q9HD90 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
NEUROD4Q9HD90 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NEUROD4Q9HD90 SAPCD2P2-201ENST00000431719 1174 ntBASIC16.68■□□□□ 0.26
NEUROD4Q9HD90 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
NEUROD4Q9HD90 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NEUROD4Q9HD90 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.68■□□□□ 0.26
NEUROD4Q9HD90 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NEUROD4Q9HD90 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NEUROD4Q9HD90 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NEUROD4Q9HD90 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NEUROD4Q9HD90 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
NEUROD4Q9HD90 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.68■□□□□ 0.26
NEUROD4Q9HD90 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
NEUROD4Q9HD90 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
NEUROD4Q9HD90 FZD10-202ENST00000539839 3282 ntBASIC16.68■□□□□ 0.26
NEUROD4Q9HD90 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.68■□□□□ 0.26
NEUROD4Q9HD90 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
NEUROD4Q9HD90 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NEUROD4Q9HD90 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NEUROD4Q9HD90 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.68■□□□□ 0.26
NEUROD4Q9HD90 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NEUROD4Q9HD90 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NEUROD4Q9HD90 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NEUROD4Q9HD90 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.68■□□□□ 0.26
NEUROD4Q9HD90 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NEUROD4Q9HD90 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NEUROD4Q9HD90 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
NEUROD4Q9HD90 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
NEUROD4Q9HD90 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
NEUROD4Q9HD90 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC16.67■□□□□ 0.26
NEUROD4Q9HD90 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.67■□□□□ 0.26
NEUROD4Q9HD90 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NEUROD4Q9HD90 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.67■□□□□ 0.26
NEUROD4Q9HD90 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
NEUROD4Q9HD90 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NEUROD4Q9HD90 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NEUROD4Q9HD90 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC16.67■□□□□ 0.26
NEUROD4Q9HD90 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NEUROD4Q9HD90 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
NEUROD4Q9HD90 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
NEUROD4Q9HD90 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NEUROD4Q9HD90 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
NEUROD4Q9HD90 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC16.67■□□□□ 0.26
NEUROD4Q9HD90 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NEUROD4Q9HD90 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NEUROD4Q9HD90 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NEUROD4Q9HD90 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NEUROD4Q9HD90 TPM4P1-201ENST00000436100 807 ntBASIC16.67■□□□□ 0.26
NEUROD4Q9HD90 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NEUROD4Q9HD90 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.67■□□□□ 0.26
NEUROD4Q9HD90 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC16.67■□□□□ 0.26
NEUROD4Q9HD90 AC068472.1-201ENST00000474589 881 ntBASIC16.67■□□□□ 0.26
NEUROD4Q9HD90 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.67■□□□□ 0.26
NEUROD4Q9HD90 KRT126P-201ENST00000549467 1181 ntBASIC16.67■□□□□ 0.26
NEUROD4Q9HD90 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.67■□□□□ 0.26
NEUROD4Q9HD90 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NEUROD4Q9HD90 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
NEUROD4Q9HD90 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NEUROD4Q9HD90 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.67■□□□□ 0.26
NEUROD4Q9HD90 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NEUROD4Q9HD90 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NEUROD4Q9HD90 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
NEUROD4Q9HD90 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.67■□□□□ 0.26
NEUROD4Q9HD90 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NEUROD4Q9HD90 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
NEUROD4Q9HD90 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.67■□□□□ 0.26
NEUROD4Q9HD90 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.67■□□□□ 0.26
NEUROD4Q9HD90 Z83836.1-201ENST00000624605 1642 ntBASIC16.67■□□□□ 0.26
NEUROD4Q9HD90 CROCCP2-202ENST00000412962 2773 ntBASIC16.66■□□□□ 0.26
NEUROD4Q9HD90 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NEUROD4Q9HD90 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NEUROD4Q9HD90 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NEUROD4Q9HD90 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
NEUROD4Q9HD90 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
NEUROD4Q9HD90 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
NEUROD4Q9HD90 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
NEUROD4Q9HD90 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
NEUROD4Q9HD90 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.66■□□□□ 0.26
NEUROD4Q9HD90 AC096633.1-201ENST00000422446 749 ntBASIC16.66■□□□□ 0.26
NEUROD4Q9HD90 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC16.66■□□□□ 0.26
NEUROD4Q9HD90 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
NEUROD4Q9HD90 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NEUROD4Q9HD90 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.66■□□□□ 0.26
NEUROD4Q9HD90 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.66■□□□□ 0.26
NEUROD4Q9HD90 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
NEUROD4Q9HD90 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.66■□□□□ 0.26
NEUROD4Q9HD90 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.66■□□□□ 0.26
NEUROD4Q9HD90 AP000550.4-202ENST00000639755 178 ntBASIC16.66■□□□□ 0.26
NEUROD4Q9HD90 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms