Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.58■□□□□ 0.56
CD248Q9HCU0 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CD248Q9HCU0 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.58■□□□□ 0.56
CD248Q9HCU0 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CD248Q9HCU0 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CD248Q9HCU0 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CD248Q9HCU0 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CD248Q9HCU0 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CD248Q9HCU0 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CD248Q9HCU0 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CD248Q9HCU0 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC18.57■□□□□ 0.56
CD248Q9HCU0 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.57■□□□□ 0.56
CD248Q9HCU0 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CD248Q9HCU0 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.57■□□□□ 0.56
CD248Q9HCU0 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.57■□□□□ 0.56
CD248Q9HCU0 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.57■□□□□ 0.56
CD248Q9HCU0 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.57■□□□□ 0.56
CD248Q9HCU0 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CD248Q9HCU0 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CD248Q9HCU0 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CD248Q9HCU0 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CD248Q9HCU0 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.57■□□□□ 0.56
CD248Q9HCU0 AC091607.1-201ENST00000490318 1060 ntBASIC18.57■□□□□ 0.56
CD248Q9HCU0 AC104819.1-201ENST00000504587 486 ntBASIC18.57■□□□□ 0.56
CD248Q9HCU0 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CD248Q9HCU0 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.57■□□□□ 0.56
CD248Q9HCU0 AL160237.2-201ENST00000556165 472 ntBASIC18.57■□□□□ 0.56
CD248Q9HCU0 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.57■□□□□ 0.56
CD248Q9HCU0 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CD248Q9HCU0 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CD248Q9HCU0 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC18.57■□□□□ 0.56
CD248Q9HCU0 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CD248Q9HCU0 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC18.57■□□□□ 0.56
CD248Q9HCU0 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CD248Q9HCU0 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CD248Q9HCU0 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.57■□□□□ 0.56
CD248Q9HCU0 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CD248Q9HCU0 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CD248Q9HCU0 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC18.57■□□□□ 0.56
CD248Q9HCU0 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CD248Q9HCU0 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CD248Q9HCU0 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CD248Q9HCU0 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CD248Q9HCU0 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.56■□□□□ 0.56
CD248Q9HCU0 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CD248Q9HCU0 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CD248Q9HCU0 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CD248Q9HCU0 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CD248Q9HCU0 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CD248Q9HCU0 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CD248Q9HCU0 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.56■□□□□ 0.56
CD248Q9HCU0 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.56■□□□□ 0.56
CD248Q9HCU0 AC106795.1-205ENST00000512851 1056 ntBASIC18.56■□□□□ 0.56
CD248Q9HCU0 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CD248Q9HCU0 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.56■□□□□ 0.56
CD248Q9HCU0 AC074051.2-201ENST00000565115 352 ntBASIC18.56■□□□□ 0.56
CD248Q9HCU0 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CD248Q9HCU0 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CD248Q9HCU0 AL353801.3-201ENST00000609898 542 ntBASIC18.56■□□□□ 0.56
CD248Q9HCU0 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CD248Q9HCU0 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.56■□□□□ 0.56
CD248Q9HCU0 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.56■□□□□ 0.56
CD248Q9HCU0 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CD248Q9HCU0 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.56■□□□□ 0.56
CD248Q9HCU0 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.56■□□□□ 0.56
CD248Q9HCU0 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CD248Q9HCU0 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CD248Q9HCU0 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CD248Q9HCU0 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CD248Q9HCU0 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.56■□□□□ 0.56
CD248Q9HCU0 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.56■□□□□ 0.56
CD248Q9HCU0 LINC00167-201ENST00000530583 1419 ntBASIC18.56■□□□□ 0.56
CD248Q9HCU0 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
CD248Q9HCU0 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CD248Q9HCU0 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CD248Q9HCU0 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CD248Q9HCU0 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC18.55■□□□□ 0.56
CD248Q9HCU0 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CD248Q9HCU0 UBALD1-205ENST00000590891 2641 ntBASIC18.55■□□□□ 0.56
CD248Q9HCU0 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CD248Q9HCU0 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CD248Q9HCU0 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CD248Q9HCU0 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.55■□□□□ 0.56
CD248Q9HCU0 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CD248Q9HCU0 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CD248Q9HCU0 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CD248Q9HCU0 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CD248Q9HCU0 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.55■□□□□ 0.56
CD248Q9HCU0 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CD248Q9HCU0 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CD248Q9HCU0 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CD248Q9HCU0 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CD248Q9HCU0 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CD248Q9HCU0 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CD248Q9HCU0 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CD248Q9HCU0 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.55■□□□□ 0.56
CD248Q9HCU0 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC18.55■□□□□ 0.56
CD248Q9HCU0 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC18.55■□□□□ 0.56
CD248Q9HCU0 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.55■□□□□ 0.56
CD248Q9HCU0 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms