Protein–RNA interactions for Protein: Q9HBW1

LRRC4, Leucine-rich repeat-containing protein 4, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC4Q9HBW1 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC4Q9HBW1 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.62■□□□□ 0.57
LRRC4Q9HBW1 AC103564.2-201ENST00000432853 1299 ntBASIC18.62■□□□□ 0.57
LRRC4Q9HBW1 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.62■□□□□ 0.57
LRRC4Q9HBW1 AC111152.3-201ENST00000569699 673 ntBASIC18.62■□□□□ 0.57
LRRC4Q9HBW1 IGHV3OR16-7-201ENST00000604106 360 ntBASIC18.62■□□□□ 0.57
LRRC4Q9HBW1 IFNL4P1-201ENST00000607083 540 ntBASIC18.62■□□□□ 0.57
LRRC4Q9HBW1 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.62■□□□□ 0.57
LRRC4Q9HBW1 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
LRRC4Q9HBW1 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC4Q9HBW1 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.62■□□□□ 0.57
LRRC4Q9HBW1 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.62■□□□□ 0.57
LRRC4Q9HBW1 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
LRRC4Q9HBW1 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC18.62■□□□□ 0.57
LRRC4Q9HBW1 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC4Q9HBW1 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
LRRC4Q9HBW1 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.62■□□□□ 0.57
LRRC4Q9HBW1 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.62■□□□□ 0.57
LRRC4Q9HBW1 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC4Q9HBW1 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC4Q9HBW1 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC18.62■□□□□ 0.57
LRRC4Q9HBW1 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.62■□□□□ 0.57
LRRC4Q9HBW1 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.62■□□□□ 0.57
LRRC4Q9HBW1 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
LRRC4Q9HBW1 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
LRRC4Q9HBW1 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.61■□□□□ 0.57
LRRC4Q9HBW1 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC4Q9HBW1 LETM1P2-201ENST00000597330 2178 ntBASIC18.61■□□□□ 0.57
LRRC4Q9HBW1 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
LRRC4Q9HBW1 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
LRRC4Q9HBW1 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.61■□□□□ 0.57
LRRC4Q9HBW1 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC4Q9HBW1 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC4Q9HBW1 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.61■□□□□ 0.57
LRRC4Q9HBW1 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.61■□□□□ 0.57
LRRC4Q9HBW1 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC4Q9HBW1 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.61■□□□□ 0.57
LRRC4Q9HBW1 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.61■□□□□ 0.57
LRRC4Q9HBW1 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC4Q9HBW1 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC4Q9HBW1 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC4Q9HBW1 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC4Q9HBW1 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC18.61■□□□□ 0.57
LRRC4Q9HBW1 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC4Q9HBW1 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.61■□□□□ 0.57
LRRC4Q9HBW1 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.61■□□□□ 0.57
LRRC4Q9HBW1 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
LRRC4Q9HBW1 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
LRRC4Q9HBW1 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.61■□□□□ 0.57
LRRC4Q9HBW1 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
LRRC4Q9HBW1 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
LRRC4Q9HBW1 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
LRRC4Q9HBW1 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC4Q9HBW1 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC4Q9HBW1 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.6■□□□□ 0.57
LRRC4Q9HBW1 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC4Q9HBW1 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
LRRC4Q9HBW1 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.6■□□□□ 0.57
LRRC4Q9HBW1 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC4Q9HBW1 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC4Q9HBW1 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC4Q9HBW1 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
LRRC4Q9HBW1 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC4Q9HBW1 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC4Q9HBW1 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC4Q9HBW1 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.6■□□□□ 0.57
LRRC4Q9HBW1 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC4Q9HBW1 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.6■□□□□ 0.57
LRRC4Q9HBW1 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC4Q9HBW1 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.6■□□□□ 0.57
LRRC4Q9HBW1 AC132008.2-207ENST00000454517 770 ntBASIC18.6■□□□□ 0.57
LRRC4Q9HBW1 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.6■□□□□ 0.57
LRRC4Q9HBW1 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.6■□□□□ 0.57
LRRC4Q9HBW1 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.6■□□□□ 0.57
LRRC4Q9HBW1 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC4Q9HBW1 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC4Q9HBW1 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
LRRC4Q9HBW1 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC4Q9HBW1 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC4Q9HBW1 SIRPAP1-201ENST00000448467 1770 ntBASIC18.6■□□□□ 0.57
LRRC4Q9HBW1 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC4Q9HBW1 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC4Q9HBW1 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
LRRC4Q9HBW1 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.6■□□□□ 0.57
LRRC4Q9HBW1 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC4Q9HBW1 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC4Q9HBW1 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC4Q9HBW1 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
LRRC4Q9HBW1 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
LRRC4Q9HBW1 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC4Q9HBW1 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC4Q9HBW1 NOC2LP2-201ENST00000407594 1944 ntBASIC18.59■□□□□ 0.57
LRRC4Q9HBW1 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
LRRC4Q9HBW1 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.59■□□□□ 0.57
LRRC4Q9HBW1 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.59■□□□□ 0.57
LRRC4Q9HBW1 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC18.59■□□□□ 0.57
LRRC4Q9HBW1 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
LRRC4Q9HBW1 AL691432.3-201ENST00000621860 400 ntBASIC18.59■□□□□ 0.57
LRRC4Q9HBW1 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
LRRC4Q9HBW1 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms