Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC20.79■□□□□ 0.92
RNF41Q9H4P4 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RNF41Q9H4P4 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF41Q9H4P4 AC003669.1-201ENST00000334569 611 ntBASIC20.79■□□□□ 0.92
RNF41Q9H4P4 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF41Q9H4P4 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.79■□□□□ 0.92
RNF41Q9H4P4 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RNF41Q9H4P4 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC20.79■□□□□ 0.92
RNF41Q9H4P4 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
RNF41Q9H4P4 TPM4P1-201ENST00000436100 807 ntBASIC20.79■□□□□ 0.92
RNF41Q9H4P4 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC20.79■□□□□ 0.92
RNF41Q9H4P4 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RNF41Q9H4P4 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RNF41Q9H4P4 AC008608.2-201ENST00000606089 416 ntBASIC20.79■□□□□ 0.92
RNF41Q9H4P4 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC20.79■□□□□ 0.92
RNF41Q9H4P4 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF41Q9H4P4 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC20.79■□□□□ 0.92
RNF41Q9H4P4 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC20.79■□□□□ 0.92
RNF41Q9H4P4 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RNF41Q9H4P4 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF41Q9H4P4 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RNF41Q9H4P4 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC20.79■□□□□ 0.92
RNF41Q9H4P4 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF41Q9H4P4 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC20.78■□□□□ 0.92
RNF41Q9H4P4 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF41Q9H4P4 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RNF41Q9H4P4 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.78■□□□□ 0.92
RNF41Q9H4P4 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC20.78■□□□□ 0.92
RNF41Q9H4P4 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF41Q9H4P4 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC20.78■□□□□ 0.92
RNF41Q9H4P4 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RNF41Q9H4P4 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC20.78■□□□□ 0.92
RNF41Q9H4P4 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC20.78■□□□□ 0.92
RNF41Q9H4P4 AF238378.1-201ENST00000526806 358 ntBASIC20.78■□□□□ 0.92
RNF41Q9H4P4 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC20.78■□□□□ 0.92
RNF41Q9H4P4 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC20.78■□□□□ 0.92
RNF41Q9H4P4 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.78■□□□□ 0.92
RNF41Q9H4P4 STK25P1-201ENST00000585406 838 ntBASIC20.78■□□□□ 0.92
RNF41Q9H4P4 MTDHP3-201ENST00000594186 672 ntBASIC20.78■□□□□ 0.92
RNF41Q9H4P4 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.78■□□□□ 0.92
RNF41Q9H4P4 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF41Q9H4P4 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF41Q9H4P4 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF41Q9H4P4 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC20.78■□□□□ 0.92
RNF41Q9H4P4 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF41Q9H4P4 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RNF41Q9H4P4 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC20.77■□□□□ 0.92
RNF41Q9H4P4 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
RNF41Q9H4P4 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF41Q9H4P4 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RNF41Q9H4P4 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RNF41Q9H4P4 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF41Q9H4P4 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RNF41Q9H4P4 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC20.77■□□□□ 0.92
RNF41Q9H4P4 AC132938.5-201ENST00000624980 1813 ntBASIC20.77■□□□□ 0.92
RNF41Q9H4P4 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.77■□□□□ 0.92
RNF41Q9H4P4 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF41Q9H4P4 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF41Q9H4P4 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.77■□□□□ 0.92
RNF41Q9H4P4 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC20.77■□□□□ 0.92
RNF41Q9H4P4 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC20.77■□□□□ 0.92
RNF41Q9H4P4 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
RNF41Q9H4P4 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RNF41Q9H4P4 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.77■□□□□ 0.92
RNF41Q9H4P4 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RNF41Q9H4P4 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC20.77■□□□□ 0.92
RNF41Q9H4P4 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RNF41Q9H4P4 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
RNF41Q9H4P4 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.91
RNF41Q9H4P4 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
RNF41Q9H4P4 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC20.77■□□□□ 0.91
RNF41Q9H4P4 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.77■□□□□ 0.91
RNF41Q9H4P4 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RNF41Q9H4P4 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RNF41Q9H4P4 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
RNF41Q9H4P4 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF41Q9H4P4 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RNF41Q9H4P4 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
RNF41Q9H4P4 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF41Q9H4P4 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF41Q9H4P4 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.76■□□□□ 0.91
RNF41Q9H4P4 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF41Q9H4P4 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC20.76■□□□□ 0.91
RNF41Q9H4P4 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RNF41Q9H4P4 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RNF41Q9H4P4 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC20.76■□□□□ 0.91
RNF41Q9H4P4 KLF4P1-201ENST00000412782 1185 ntBASIC20.76■□□□□ 0.91
RNF41Q9H4P4 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF41Q9H4P4 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC20.76■□□□□ 0.91
RNF41Q9H4P4 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.76■□□□□ 0.91
RNF41Q9H4P4 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC20.76■□□□□ 0.91
RNF41Q9H4P4 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.76■□□□□ 0.91
RNF41Q9H4P4 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC20.76■□□□□ 0.91
RNF41Q9H4P4 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RNF41Q9H4P4 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
RNF41Q9H4P4 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RNF41Q9H4P4 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF41Q9H4P4 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.76■□□□□ 0.91
RNF41Q9H4P4 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RNF41Q9H4P4 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms