Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 AC108475.1-201ENST00000507880 950 ntBASIC19.73■□□□□ 0.75
RNF39Q9H2S5 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC19.73■□□□□ 0.75
RNF39Q9H2S5 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.73■□□□□ 0.75
RNF39Q9H2S5 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC19.73■□□□□ 0.75
RNF39Q9H2S5 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.73■□□□□ 0.75
RNF39Q9H2S5 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC19.73■□□□□ 0.75
RNF39Q9H2S5 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.73■□□□□ 0.75
RNF39Q9H2S5 AL353801.3-201ENST00000609898 542 ntBASIC19.73■□□□□ 0.75
RNF39Q9H2S5 AL121772.3-201ENST00000610840 674 ntBASIC19.73■□□□□ 0.75
RNF39Q9H2S5 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
RNF39Q9H2S5 AL603839.4-201ENST00000624658 1005 ntBASIC19.73■□□□□ 0.75
RNF39Q9H2S5 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.73■□□□□ 0.75
RNF39Q9H2S5 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.73■□□□□ 0.75
RNF39Q9H2S5 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF39Q9H2S5 AC126763.1-201ENST00000552015 2118 ntBASIC19.73■□□□□ 0.75
RNF39Q9H2S5 NUSAP1-203ENST00000450592 1301 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
RNF39Q9H2S5 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF39Q9H2S5 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.73■□□□□ 0.75
RNF39Q9H2S5 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
RNF39Q9H2S5 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF39Q9H2S5 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF39Q9H2S5 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF39Q9H2S5 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF39Q9H2S5 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.72■□□□□ 0.75
RNF39Q9H2S5 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.72■□□□□ 0.75
RNF39Q9H2S5 AC120498.9-201ENST00000339021 3867 ntBASIC19.72■□□□□ 0.75
RNF39Q9H2S5 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF39Q9H2S5 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF39Q9H2S5 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RNF39Q9H2S5 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
RNF39Q9H2S5 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF39Q9H2S5 NPM1P10-201ENST00000398310 865 ntBASIC19.72■□□□□ 0.75
RNF39Q9H2S5 AL031779.1-201ENST00000415663 330 ntBASIC19.72■□□□□ 0.75
RNF39Q9H2S5 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC19.72■□□□□ 0.75
RNF39Q9H2S5 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC19.72■□□□□ 0.75
RNF39Q9H2S5 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RNF39Q9H2S5 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RNF39Q9H2S5 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.72■□□□□ 0.75
RNF39Q9H2S5 AC112250.1-201ENST00000504640 745 ntBASIC19.72■□□□□ 0.75
RNF39Q9H2S5 CARD8-214ENST00000520007 614 ntTSL 2 BASIC19.72■□□□□ 0.75
RNF39Q9H2S5 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.72■□□□□ 0.75
RNF39Q9H2S5 SNRPGP1-201ENST00000553864 222 ntBASIC19.72■□□□□ 0.75
RNF39Q9H2S5 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC19.72■□□□□ 0.75
RNF39Q9H2S5 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.72■□□□□ 0.75
RNF39Q9H2S5 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.72■□□□□ 0.75
RNF39Q9H2S5 AC011840.4-201ENST00000578471 627 ntBASIC19.72■□□□□ 0.75
RNF39Q9H2S5 AC013444.2-201ENST00000603317 787 ntBASIC19.72■□□□□ 0.75
RNF39Q9H2S5 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC19.72■□□□□ 0.75
RNF39Q9H2S5 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RNF39Q9H2S5 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC19.72■□□□□ 0.75
RNF39Q9H2S5 AC097478.3-201ENST00000620420 872 ntBASIC19.72■□□□□ 0.75
RNF39Q9H2S5 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF39Q9H2S5 LINC00602-201ENST00000629776 2065 ntBASIC19.72■□□□□ 0.75
RNF39Q9H2S5 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
RNF39Q9H2S5 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.72■□□□□ 0.75
RNF39Q9H2S5 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF39Q9H2S5 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF39Q9H2S5 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
RNF39Q9H2S5 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RNF39Q9H2S5 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.72■□□□□ 0.75
RNF39Q9H2S5 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
RNF39Q9H2S5 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
RNF39Q9H2S5 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
RNF39Q9H2S5 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RNF39Q9H2S5 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF39Q9H2S5 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RNF39Q9H2S5 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF39Q9H2S5 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF39Q9H2S5 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.71■□□□□ 0.75
RNF39Q9H2S5 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
RNF39Q9H2S5 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RNF39Q9H2S5 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RNF39Q9H2S5 RPL37A-205ENST00000446558 495 ntTSL 5 BASIC19.71■□□□□ 0.75
RNF39Q9H2S5 AC009245.1-201ENST00000456481 862 ntBASIC19.71■□□□□ 0.75
RNF39Q9H2S5 AC068472.1-201ENST00000474589 881 ntBASIC19.71■□□□□ 0.75
RNF39Q9H2S5 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC19.71■□□□□ 0.75
RNF39Q9H2S5 AC021146.11-201ENST00000503319 491 ntBASIC19.71■□□□□ 0.75
RNF39Q9H2S5 AC087894.2-201ENST00000541797 462 ntTSL 4 BASIC19.71■□□□□ 0.75
RNF39Q9H2S5 AC026254.4-201ENST00000581118 454 ntTSL 2 BASIC19.71■□□□□ 0.75
RNF39Q9H2S5 ADAD1P2-201ENST00000588476 646 ntBASIC19.71■□□□□ 0.75
RNF39Q9H2S5 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC19.71■□□□□ 0.75
RNF39Q9H2S5 AC009090.3-201ENST00000616553 565 ntBASIC19.71■□□□□ 0.75
RNF39Q9H2S5 LINC01697-206ENST00000616647 544 ntTSL 5 BASIC19.71■□□□□ 0.75
RNF39Q9H2S5 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
RNF39Q9H2S5 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF39Q9H2S5 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF39Q9H2S5 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF39Q9H2S5 AP000974.1-201ENST00000623909 2387 ntBASIC19.71■□□□□ 0.75
RNF39Q9H2S5 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF39Q9H2S5 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
RNF39Q9H2S5 PSMC1P12-201ENST00000436509 1314 ntBASIC19.71■□□□□ 0.75
RNF39Q9H2S5 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
RNF39Q9H2S5 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
RNF39Q9H2S5 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF39Q9H2S5 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
RNF39Q9H2S5 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
RNF39Q9H2S5 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.7■□□□□ 0.74
RNF39Q9H2S5 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF39Q9H2S5 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
RNF39Q9H2S5 AC004870.1-201ENST00000315132 882 ntBASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms