Protein–RNA interactions for Protein: Q9H2H0

CXXC4, CXXC-type zinc finger protein 4, humanhuman

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4Q9H2H0 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CXXC4Q9H2H0 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CXXC4Q9H2H0 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CXXC4Q9H2H0 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CXXC4Q9H2H0 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CXXC4Q9H2H0 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
CXXC4Q9H2H0 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CXXC4Q9H2H0 TP73-AS1-210ENST00000637775 1455 ntBASIC15.4■□□□□ 0.06
CXXC4Q9H2H0 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CXXC4Q9H2H0 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CXXC4Q9H2H0 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CXXC4Q9H2H0 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CXXC4Q9H2H0 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CXXC4Q9H2H0 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CXXC4Q9H2H0 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC15.39■□□□□ 0.05
CXXC4Q9H2H0 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.39■□□□□ 0.05
CXXC4Q9H2H0 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CXXC4Q9H2H0 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
CXXC4Q9H2H0 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CXXC4Q9H2H0 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
CXXC4Q9H2H0 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CXXC4Q9H2H0 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CXXC4Q9H2H0 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CXXC4Q9H2H0 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
CXXC4Q9H2H0 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CXXC4Q9H2H0 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CXXC4Q9H2H0 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CXXC4Q9H2H0 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.39■□□□□ 0.05
CXXC4Q9H2H0 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.39■□□□□ 0.05
CXXC4Q9H2H0 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC15.39■□□□□ 0.05
CXXC4Q9H2H0 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.39■□□□□ 0.05
CXXC4Q9H2H0 RNA5SP416-201ENST00000516838 111 ntBASIC15.39■□□□□ 0.05
CXXC4Q9H2H0 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC15.39■□□□□ 0.05
CXXC4Q9H2H0 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.39■□□□□ 0.05
CXXC4Q9H2H0 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CXXC4Q9H2H0 AC002347.1-201ENST00000569543 541 ntBASIC15.39■□□□□ 0.05
CXXC4Q9H2H0 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.39■□□□□ 0.05
CXXC4Q9H2H0 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC15.39■□□□□ 0.05
CXXC4Q9H2H0 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC15.39■□□□□ 0.05
CXXC4Q9H2H0 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CXXC4Q9H2H0 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CXXC4Q9H2H0 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC15.39■□□□□ 0.05
CXXC4Q9H2H0 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC15.39■□□□□ 0.05
CXXC4Q9H2H0 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC15.39■□□□□ 0.05
CXXC4Q9H2H0 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CXXC4Q9H2H0 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC15.39■□□□□ 0.05
CXXC4Q9H2H0 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC15.39■□□□□ 0.05
CXXC4Q9H2H0 LINC00602-201ENST00000629776 2065 ntBASIC15.39■□□□□ 0.05
CXXC4Q9H2H0 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CXXC4Q9H2H0 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.39■□□□□ 0.05
CXXC4Q9H2H0 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CXXC4Q9H2H0 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CXXC4Q9H2H0 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CXXC4Q9H2H0 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CXXC4Q9H2H0 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CXXC4Q9H2H0 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC15.38■□□□□ 0.05
CXXC4Q9H2H0 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC15.38■□□□□ 0.05
CXXC4Q9H2H0 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CXXC4Q9H2H0 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CXXC4Q9H2H0 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC15.38■□□□□ 0.05
CXXC4Q9H2H0 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CXXC4Q9H2H0 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CXXC4Q9H2H0 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CXXC4Q9H2H0 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CXXC4Q9H2H0 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CXXC4Q9H2H0 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CXXC4Q9H2H0 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CXXC4Q9H2H0 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC15.38■□□□□ 0.05
CXXC4Q9H2H0 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CXXC4Q9H2H0 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
CXXC4Q9H2H0 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
CXXC4Q9H2H0 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CXXC4Q9H2H0 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CXXC4Q9H2H0 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CXXC4Q9H2H0 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
CXXC4Q9H2H0 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.38■□□□□ 0.05
CXXC4Q9H2H0 CYMP-203ENST00000474680 1263 ntBASIC15.38■□□□□ 0.05
CXXC4Q9H2H0 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.38■□□□□ 0.05
CXXC4Q9H2H0 AC092910.1-201ENST00000482027 1129 ntBASIC15.38■□□□□ 0.05
CXXC4Q9H2H0 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC15.38■□□□□ 0.05
CXXC4Q9H2H0 DUTP2-201ENST00000519164 463 ntBASIC15.38■□□□□ 0.05
CXXC4Q9H2H0 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.38■□□□□ 0.05
CXXC4Q9H2H0 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.38■□□□□ 0.05
CXXC4Q9H2H0 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC15.38■□□□□ 0.05
CXXC4Q9H2H0 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.38■□□□□ 0.05
CXXC4Q9H2H0 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CXXC4Q9H2H0 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
CXXC4Q9H2H0 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
CXXC4Q9H2H0 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC15.38■□□□□ 0.05
CXXC4Q9H2H0 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CXXC4Q9H2H0 KRT18P28-201ENST00000453838 1332 ntBASIC15.38■□□□□ 0.05
CXXC4Q9H2H0 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC15.38■□□□□ 0.05
CXXC4Q9H2H0 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
CXXC4Q9H2H0 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CXXC4Q9H2H0 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC15.38■□□□□ 0.05
CXXC4Q9H2H0 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
CXXC4Q9H2H0 STK4-201ENST00000372801 2038 ntTSL 2 BASIC15.38■□□□□ 0.05
CXXC4Q9H2H0 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
CXXC4Q9H2H0 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
CXXC4Q9H2H0 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 93.1 ms