Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
POLR1EQ9GZS1 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
POLR1EQ9GZS1 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
POLR1EQ9GZS1 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
POLR1EQ9GZS1 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
POLR1EQ9GZS1 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.88■□□□□ 0.45
POLR1EQ9GZS1 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
POLR1EQ9GZS1 PCDHB18P-201ENST00000524813 2368 ntBASIC17.88■□□□□ 0.45
POLR1EQ9GZS1 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
POLR1EQ9GZS1 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
POLR1EQ9GZS1 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
POLR1EQ9GZS1 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
POLR1EQ9GZS1 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
POLR1EQ9GZS1 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
POLR1EQ9GZS1 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
POLR1EQ9GZS1 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC17.88■□□□□ 0.45
POLR1EQ9GZS1 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
POLR1EQ9GZS1 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.88■□□□□ 0.45
POLR1EQ9GZS1 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
POLR1EQ9GZS1 FOSL1P1-201ENST00000511041 816 ntBASIC17.88■□□□□ 0.45
POLR1EQ9GZS1 IGHV3-52-201ENST00000519770 353 ntBASIC17.88■□□□□ 0.45
POLR1EQ9GZS1 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.88■□□□□ 0.45
POLR1EQ9GZS1 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.88■□□□□ 0.45
POLR1EQ9GZS1 PRELID1P1-202ENST00000567272 903 ntBASIC17.88■□□□□ 0.45
POLR1EQ9GZS1 PRR29-207ENST00000580752 458 ntTSL 3 BASIC17.88■□□□□ 0.45
POLR1EQ9GZS1 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC17.88■□□□□ 0.45
POLR1EQ9GZS1 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC17.88■□□□□ 0.45
POLR1EQ9GZS1 AC019129.2-201ENST00000609837 1235 ntBASIC17.88■□□□□ 0.45
POLR1EQ9GZS1 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.88■□□□□ 0.45
POLR1EQ9GZS1 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC17.88■□□□□ 0.45
POLR1EQ9GZS1 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC17.88■□□□□ 0.45
POLR1EQ9GZS1 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
POLR1EQ9GZS1 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.88■□□□□ 0.45
POLR1EQ9GZS1 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
POLR1EQ9GZS1 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
POLR1EQ9GZS1 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
POLR1EQ9GZS1 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC17.88■□□□□ 0.45
POLR1EQ9GZS1 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
POLR1EQ9GZS1 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
POLR1EQ9GZS1 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
POLR1EQ9GZS1 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC17.88■□□□□ 0.45
POLR1EQ9GZS1 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
POLR1EQ9GZS1 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC17.87■□□□□ 0.45
POLR1EQ9GZS1 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
POLR1EQ9GZS1 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
POLR1EQ9GZS1 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
POLR1EQ9GZS1 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
POLR1EQ9GZS1 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
POLR1EQ9GZS1 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
POLR1EQ9GZS1 MYCLP1-201ENST00000372451 1075 ntBASIC17.87■□□□□ 0.45
POLR1EQ9GZS1 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
POLR1EQ9GZS1 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC17.87■□□□□ 0.45
POLR1EQ9GZS1 KRT16P4-201ENST00000453883 522 ntBASIC17.87■□□□□ 0.45
POLR1EQ9GZS1 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.87■□□□□ 0.45
POLR1EQ9GZS1 KRT18P56-201ENST00000507275 550 ntBASIC17.87■□□□□ 0.45
POLR1EQ9GZS1 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.87■□□□□ 0.45
POLR1EQ9GZS1 AC111152.3-201ENST00000569699 673 ntBASIC17.87■□□□□ 0.45
POLR1EQ9GZS1 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.87■□□□□ 0.45
POLR1EQ9GZS1 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
POLR1EQ9GZS1 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
POLR1EQ9GZS1 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.87■□□□□ 0.45
POLR1EQ9GZS1 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
POLR1EQ9GZS1 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.87■□□□□ 0.45
POLR1EQ9GZS1 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
POLR1EQ9GZS1 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
POLR1EQ9GZS1 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
POLR1EQ9GZS1 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
POLR1EQ9GZS1 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC17.87■□□□□ 0.45
POLR1EQ9GZS1 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
POLR1EQ9GZS1 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
POLR1EQ9GZS1 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.86■□□□□ 0.45
POLR1EQ9GZS1 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
POLR1EQ9GZS1 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
POLR1EQ9GZS1 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC17.86■□□□□ 0.45
POLR1EQ9GZS1 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
POLR1EQ9GZS1 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC17.86■□□□□ 0.45
POLR1EQ9GZS1 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
POLR1EQ9GZS1 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.86■□□□□ 0.45
POLR1EQ9GZS1 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
POLR1EQ9GZS1 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
POLR1EQ9GZS1 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
POLR1EQ9GZS1 AC109462.3-201ENST00000573934 613 ntBASIC17.86■□□□□ 0.45
POLR1EQ9GZS1 MIR5100-201ENST00000579544 119 ntBASIC17.86■□□□□ 0.45
POLR1EQ9GZS1 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.86■□□□□ 0.45
POLR1EQ9GZS1 AL121772.3-201ENST00000610840 674 ntBASIC17.86■□□□□ 0.45
POLR1EQ9GZS1 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.86■□□□□ 0.45
POLR1EQ9GZS1 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.86■□□□□ 0.45
POLR1EQ9GZS1 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
POLR1EQ9GZS1 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
POLR1EQ9GZS1 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
POLR1EQ9GZS1 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
POLR1EQ9GZS1 AL049757.1-201ENST00000616842 1596 ntBASIC17.86■□□□□ 0.45
POLR1EQ9GZS1 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.86■□□□□ 0.45
POLR1EQ9GZS1 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.86■□□□□ 0.45
POLR1EQ9GZS1 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
POLR1EQ9GZS1 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
POLR1EQ9GZS1 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
POLR1EQ9GZS1 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
POLR1EQ9GZS1 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
POLR1EQ9GZS1 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms