Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
TRIM2Q9C040 AL023806.1-201ENST00000603994 1649 ntBASIC16.27■□□□□ 0.19
TRIM2Q9C040 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM2Q9C040 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM2Q9C040 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.26■□□□□ 0.19
TRIM2Q9C040 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC16.26■□□□□ 0.19
TRIM2Q9C040 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.26■□□□□ 0.19
TRIM2Q9C040 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.26■□□□□ 0.19
TRIM2Q9C040 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM2Q9C040 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM2Q9C040 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM2Q9C040 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.26■□□□□ 0.19
TRIM2Q9C040 BX276092.7-203ENST00000637198 1536 ntBASIC16.26■□□□□ 0.19
TRIM2Q9C040 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.26■□□□□ 0.19
TRIM2Q9C040 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM2Q9C040 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.26■□□□□ 0.19
TRIM2Q9C040 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.26■□□□□ 0.19
TRIM2Q9C040 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC16.26■□□□□ 0.19
TRIM2Q9C040 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM2Q9C040 FAM86EP-206ENST00000510506 987 ntBASIC16.26■□□□□ 0.19
TRIM2Q9C040 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM2Q9C040 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.26■□□□□ 0.19
TRIM2Q9C040 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM2Q9C040 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.26■□□□□ 0.19
TRIM2Q9C040 AP000550.4-202ENST00000639755 178 ntBASIC16.26■□□□□ 0.19
TRIM2Q9C040 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM2Q9C040 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.26■□□□□ 0.19
TRIM2Q9C040 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM2Q9C040 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM2Q9C040 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.26■□□□□ 0.19
TRIM2Q9C040 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.26■□□□□ 0.19
TRIM2Q9C040 LINC01311-201ENST00000565162 1445 ntBASIC16.26■□□□□ 0.19
TRIM2Q9C040 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM2Q9C040 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM2Q9C040 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM2Q9C040 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TRIM2Q9C040 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TRIM2Q9C040 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TRIM2Q9C040 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM2Q9C040 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM2Q9C040 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM2Q9C040 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
TRIM2Q9C040 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.25■□□□□ 0.19
TRIM2Q9C040 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM2Q9C040 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM2Q9C040 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC16.25■□□□□ 0.19
TRIM2Q9C040 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM2Q9C040 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.25■□□□□ 0.19
TRIM2Q9C040 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM2Q9C040 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.25■□□□□ 0.19
TRIM2Q9C040 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.25■□□□□ 0.19
TRIM2Q9C040 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.25■□□□□ 0.19
TRIM2Q9C040 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM2Q9C040 PCED1CP-201ENST00000419887 785 ntBASIC16.25■□□□□ 0.19
TRIM2Q9C040 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.25■□□□□ 0.19
TRIM2Q9C040 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM2Q9C040 MTCL1P1-201ENST00000446207 792 ntBASIC16.25■□□□□ 0.19
TRIM2Q9C040 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.25■□□□□ 0.19
TRIM2Q9C040 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM2Q9C040 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
TRIM2Q9C040 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC16.25■□□□□ 0.19
TRIM2Q9C040 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC16.25■□□□□ 0.19
TRIM2Q9C040 AC005332.3-201ENST00000589904 676 ntBASIC16.25■□□□□ 0.19
TRIM2Q9C040 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM2Q9C040 HYMAI.1-201ENST00000620949 238 ntBASIC16.25■□□□□ 0.19
TRIM2Q9C040 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM2Q9C040 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM2Q9C040 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM2Q9C040 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM2Q9C040 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TRIM2Q9C040 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
TRIM2Q9C040 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
TRIM2Q9C040 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM2Q9C040 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM2Q9C040 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM2Q9C040 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM2Q9C040 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TRIM2Q9C040 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM2Q9C040 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM2Q9C040 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM2Q9C040 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
TRIM2Q9C040 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM2Q9C040 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM2Q9C040 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.24■□□□□ 0.19
TRIM2Q9C040 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM2Q9C040 REXO1L11P-201ENST00000620964 1927 ntBASIC16.24■□□□□ 0.19
TRIM2Q9C040 AL645608.8-201ENST00000606034 2086 ntBASIC16.24■□□□□ 0.19
TRIM2Q9C040 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM2Q9C040 BAALC-202ENST00000306391 243 ntTSL 5 BASIC16.24■□□□□ 0.19
TRIM2Q9C040 BAALC-204ENST00000330955 222 ntTSL 5 BASIC16.24■□□□□ 0.19
TRIM2Q9C040 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM2Q9C040 DAP-202ENST00000432074 1048 ntTSL 2 BASIC16.24■□□□□ 0.19
TRIM2Q9C040 AC068472.1-201ENST00000474589 881 ntBASIC16.24■□□□□ 0.19
TRIM2Q9C040 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM2Q9C040 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.24■□□□□ 0.19
TRIM2Q9C040 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC16.24■□□□□ 0.19
TRIM2Q9C040 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.24■□□□□ 0.19
TRIM2Q9C040 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.24■□□□□ 0.19
TRIM2Q9C040 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.24■□□□□ 0.19
TRIM2Q9C040 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms